Structure 5DNF

Structure Details

PDB ID: 5DNF open_in_new
Protein: CCL5_HUMAN
Organism: Homo sapiens
UniProt ID: P13501 open_in_new

Method: X-ray
Resolution: 2.55 Å
Date: April 13, 2016
Reference: 10.1073/PNAS.1523981113 open_in_new
State: Oligomer

Download Full PDB

3D View

NGL is a WebGL based 3D viewer powered by MMTF.

Chemokine-Partner Complexes

View complex: CCL5 (chain I) – Heparin (chain L)

View complex: CCL5 (chain D) – Heparin (chain K)

View complex: CCL5 (chain C) – Heparin (chain J)

Segment	N-term																																	CX			N-loop												B1								30s-loop									B2							40s-loop					B3					50s-loop					Helix											C-term
	NTc.Cm32	NTc.Cm31	NTc.Cm30	NTc.Cm29	NTc.Cm28	NTc.Cm27	NTc.Cm26	NTc.Cm25	NTc.Cm24	NTc.Cm23	NTc.Cm22	NTc.Cm21	NTc.Cm20	NTc.Cm19	NTc.Cm18	NTc.Cm17	NTc.Cm16	NTc.Cm15	NTc.Cm14	NTc.Cm13	NTc.Cm12	NTc.Cm11	NTc.Cm10	NTc.Cm9	NTc.Cm8	NTc.Cm7	NTc.Cm6	NTc.Cm5	NTc.Cm4	NTc.Cm3	NTc.Cm2	NTc.Cm1		CX.1	CX.5		cxb1.1	cxb1.2	cxb1.5	cxb1.6	cxb1.7	cxb1.8	cxb1.10	cxb1.11	cxb1.14	cxb1.15	cxb1.16		B1.1	B1.2	B1.3	B1.4	B1.5	B1.6	B1.7		b1b2.4	b1b2.6	b1b2.9	b1b2.10	b1b2.12	b1b2.13	b1b2.14	b1b2.16		B2.1	B2.2	B2.3	B2.4	B2.5	B2.6		b2b3.2	b2b3.4	b2b3.11	b2b3.12		B3.1	B3.2	B3.3	B3.4		b3h.1	b3h.2	b3h.3	b3h.4		H.1	H.2	H.3	H.4	H.5	H.6	H.7	H.8	H.9	H.10		CT.1	CT.2	CT.3
UniProt Sequence	M	K	V	S	A	A	A	L	A	V	I	L	I	A	T	A	L	C	A	P	A	S	A	S	P	Y	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain I)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain H)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain G)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain F)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain E)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain A)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain C)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain D)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S
Structure (Chain B)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	S	S	D	T	T	P		C	C		F	A	Y	I	A	R	P	L	P	R	A		H	I	K	E	Y	F	Y		T	S	G	K	C	S	N	P		A	V	V	F	V	T		R	K	N	R		Q	V	C	A		N	P	E	K		K	W	V	R	E	Y	I	N	S	L		E	M	S