PDB structure 5EKI
Structure details
- PDB ID: 5EKI open_in_new
- Protein: CCL21_HUMAN
- Organism: Homo sapiens
- UniProt ID: O00585 open_in_new
- Method: X-ray
- Resolution: 1.9 Å
- Date: Oct. 5, 2016
- Reference: 10.1021/ACS.BIOCHEM.6B00304 open_in_new
- State: oligomer
Sequence alignment
| Segment | 33 | 34 | 35 | 36 | 37 | 38 | 39 | 40 | 41 | 42 | 43 | 44 | 45 | 46 | 47 | 48 | 49 | 50 | 51 | 52 | 53 | 54 | 55 | 56 | 57 | 58 | 59 | 60 | 61 | 62 | 63 | 67 | 68 | 69 | 70 | 71 | 72 | 73 | 74 | 75 | 76 | 80 | 81 | 82 | 83 | 84 | 85 | 86 | 87 | 88 | 89 | 90 | 91 | 92 | 93 | 94 | 95 | 96 | 97 | 99 | 100 | 101 | 102 | 103 | 104 | 105 | 106 | 107 | 108 | 109 | 113 | 114 | 115 | 116 | 117 | 118 | 119 | 120 | 121 | 122 | 123 | 124 | 125 | 126 | 127 | 128 | 129 | 130 | 131 | 132 | 133 | 134 | 135 | 136 | 137 | 138 | 139 | 140 | 141 | 142 | 143 | 144 | 145 | 146 | 147 | 148 | 149 | 150 | 151 | 152 | 153 | 154 | 155 | 156 | 157 | 158 | 159 | 160 | 161 | 162 | 163 | 164 | 165 | 166 | 167 | 168 | 169 | 170 | 171 | 172 | 173 | 174 | 175 | 176 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProt Sequence | M | A | Q | S | L | A | L | S | L | L | I | L | V | L | A | F | G | I | P | R | T | Q | G | S | D | G | G | A | Q | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | P | A | Q | G | C | R | K | D | R | G | A | S | K | T | G | K | K | G | K | G | S | K | G | C | K | R | T | E | R | S | Q | T | P | K | G | P |
| Structure Sequence (Chain E) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | A | Q | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | P | A | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| Structure Sequence (Chain A) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | Q | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | P | A | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| Structure Sequence (Chain D) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | Q | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | P |
| Structure Sequence (Chain B) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | Q | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | P |
| Structure Sequence (Chain C) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | P |
| Structure Sequence (Chain F) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | D | C | C | L | K | Y | S | Q | R | K | I | P | A | K | V | V | R | S | Y | R | K | Q | E | P | S | L | G | C | S | I | P | A | I | L | F | L | P | R | K | R | S | Q | A | E | L | C | A | D | P | K | E | L | W | V | Q | Q | L | M | Q | H | L | D | K | T | P | S | P | Q | K | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | P |
| Mutation |
Structure Entities
C-C motif chemokine 21 (A, B, C, D, E, F)
Organism: None
UNP Accession: O00585
PFAM Accession: PF00048
Entity Type: Protein
SULFATE ION (A, B, C, E, F)
Organism: None
UNP Accession: None
PFAM Accession: None
Entity Type: Non-polymer
