Predicted complex interactions
CXCL13_HUMAN + CX3CR1
SUMMARY
- Chemokine
- CXCL13_HUMAN View chemokine entry
- Chemokine organism
- Homo sapiens
- Partner
- CX3CR1 View partner entry
- Partner description
- UniProt: P49238; Gene: cx3c1_human; Family: Chemokine
- Interactions detected
- 95
3D VIEW
Model confidence legend
- Very high confidence (pLDDT > 90)
- High confidence (70 ≤ pLDDT < 90)
- Low confidence (50 ≤ pLDDT < 70)
- Very low confidence (pLDDT < 50)
RESIDUE CONTACTS
Residues are ordered by chemokine position and interaction type. Use the viewer controls to highlight contacting residues.
Download contacts (CSV)| Chemokine residue | CCN | Partner residue | GPCRdb generic | Interaction |
|---|---|---|---|---|
| VAL 1 | NTc.Cm32 | TYR 247 | 6.51x51 | Hydrophobic |
| VAL 1 | NTc.Cm32 | TYR 247 | 6.51x51 | VdWContact |
| VAL 1 | NTc.Cm32 | ILE 251 | 6.55x55 | Hydrophobic |
| VAL 1 | NTc.Cm32 | ILE 251 | 6.55x55 | VdWContact |
| VAL 1 | NTc.Cm32 | LEU 275 | 7.35x34 | Hydrophobic |
| VAL 1 | NTc.Cm32 | LEU 275 | 7.35x34 | VdWContact |
| VAL 1 | NTc.Cm32 | GLU 279 | 7.39x38 | Cationic |
| VAL 1 | NTc.Cm32 | GLU 279 | 7.39x38 | VdWContact |
| LEU 2 | NTc.Cm31 | TYR 38 | 1.39x39 | Hydrophobic |
| LEU 2 | NTc.Cm31 | TRP 87 | 2.60x60 | Hydrophobic |
| LEU 2 | NTc.Cm31 | TRP 87 | 2.60x60 | VdWContact |
| LEU 2 | NTc.Cm31 | PHE 109 | 3.32x32 | Hydrophobic |
| LEU 2 | NTc.Cm31 | PHE 109 | 3.32x32 | VdWContact |
| LEU 2 | NTc.Cm31 | GLU 279 | 7.39x38 | HBDonor |
| LEU 2 | NTc.Cm31 | GLU 279 | 7.39x38 | VdWContact |
| LEU 2 | NTc.Cm31 | PHE 283 | 7.43x42 | Hydrophobic |
| LEU 2 | NTc.Cm31 | PHE 283 | 7.43x42 | VdWContact |
| GLU 3 | NTc.Cm30 | THR 106 | 3.29x29 | Hydrophobic |
| GLU 3 | NTc.Cm30 | PHE 110 | 3.33x33 | Hydrophobic |
| GLU 3 | NTc.Cm30 | THR 168 | 4.64x65 | HBAcceptor |
| GLU 3 | NTc.Cm30 | THR 168 | 4.64x65 | VdWContact |
| GLU 3 | NTc.Cm30 | ARG 191 | 5.38x39 | Anionic |
| GLU 3 | NTc.Cm30 | ARG 191 | 5.38x39 | HBAcceptor |
| GLU 3 | NTc.Cm30 | ARG 191 | 5.38x39 | VdWContact |
| VAL 4 | NTc.Cm29 | PRO 188 | 5.35x36 | Hydrophobic |
| VAL 4 | NTc.Cm29 | ARG 191 | 5.38x39 | Hydrophobic |
| VAL 4 | NTc.Cm29 | ARG 191 | 5.38x39 | VdWContact |
| VAL 4 | NTc.Cm29 | ASN 192 | 5.39x40 | VdWContact |
| TYR 5 | NTc.Cm28 | MET 250 | 6.54x54 | HBDonor |
| TYR 5 | NTc.Cm28 | GLU 254 | 6.58x58 | Hydrophobic |
| TYR 5 | NTc.Cm28 | GLU 254 | 6.58x58 | VdWContact |
| TYR 5 | NTc.Cm28 | LEU 275 | 7.35x34 | Hydrophobic |
| TYR 5 | NTc.Cm28 | LEU 275 | 7.35x34 | VdWContact |
| TYR 6 | NTc.Cm27 | TRP 87 | 2.60x60 | Hydrophobic |
| TYR 6 | NTc.Cm27 | TRP 87 | 2.60x60 | VdWContact |
| TYR 6 | NTc.Cm27 | TYR 90 | 2.63x63 | Hydrophobic |
| TYR 6 | NTc.Cm27 | TYR 90 | 2.63x63 | VdWContact |
| TYR 6 | NTc.Cm27 | LEU 91 | 2.64x64 | Hydrophobic |
| THR 7 | NTc.Cm26 | LEU 176 | 45.51x51 | Hydrophobic |
| THR 7 | NTc.Cm26 | LEU 176 | 45.51x51 | VdWContact |
| SER 8 | NTc.Cm25 | ARG 272 | 7.32x31 | HBAcceptor |
| SER 8 | NTc.Cm25 | ARG 272 | 7.32x31 | VdWContact |
| LEU 9 | NTc.Cm24 | LEU 91 | 2.64x64 | Hydrophobic |
| LEU 9 | NTc.Cm24 | LEU 91 | 2.64x64 | VdWContact |
| LEU 9 | NTc.Cm24 | ARG 272 | 7.32x31 | HBAcceptor |
| LEU 9 | NTc.Cm24 | ARG 272 | 7.32x31 | VdWContact |
| ARG 10 | NTc.Cm23 | VAL 27 | 1.28x28 | Hydrophobic |
| ARG 10 | NTc.Cm23 | VAL 27 | 1.28x28 | VdWContact |
| ARG 10 | NTc.Cm23 | TYR 90 | 2.63x63 | VdWContact |
| ARG 10 | NTc.Cm23 | LEU 91 | 2.64x64 | HBDonor |
| ARG 10 | NTc.Cm23 | LEU 91 | 2.64x64 | VdWContact |
| ARG 10 | NTc.Cm23 | ASN 93 | 2.66x66 | HBDonor |
| ARG 10 | NTc.Cm23 | ASN 93 | 2.66x66 | VdWContact |
| CYS 11 | NTc.Cm22 | VAL 27 | 1.28x28 | VdWContact |
| ARG 12 | NTc.Cm21 | TYR 22 | - | Hydrophobic |
| ARG 12 | NTc.Cm21 | TYR 22 | - | VdWContact |
| ARG 12 | NTc.Cm21 | ILE 23 | 1.24x24 | HBAcceptor |
| ARG 12 | NTc.Cm21 | ILE 23 | 1.24x24 | VdWContact |
| CYS 13 | NTc.Cm20 | CYS 21 | - | VdWContact |
| VAL 14 | NTc.Cm19 | CYS 21 | - | HBDonor |
| VAL 14 | NTc.Cm19 | CYS 21 | - | Hydrophobic |
| VAL 14 | NTc.Cm19 | CYS 21 | - | VdWContact |
| VAL 14 | NTc.Cm19 | ILE 23 | 1.24x24 | Hydrophobic |
| VAL 14 | NTc.Cm19 | ILE 23 | 1.24x24 | VdWContact |
| GLN 15 | NTc.Cm18 | GLU 19 | - | Hydrophobic |
| GLN 15 | NTc.Cm18 | GLU 19 | - | VdWContact |
| GLN 15 | NTc.Cm18 | ALA 20 | - | VdWContact |
| GLN 15 | NTc.Cm18 | CYS 21 | - | HBAcceptor |
| GLN 15 | NTc.Cm18 | CYS 21 | - | Hydrophobic |
| GLN 15 | NTc.Cm18 | CYS 21 | - | VdWContact |
| GLN 15 | NTc.Cm18 | ARG 268 | 7.28x27 | VdWContact |
| SER 17 | NTc.Cm16 | ALA 20 | - | VdWContact |
| VAL 19 | NTc.Cm14 | TYR 14 | - | Hydrophobic |
| PHE 20 | NTc.Cm13 | TYR 14 | - | HBAcceptor |
| ARG 34 | CX.4 | GLU 172 | - | VdWContact |
| GLY 35 | CX.5 | GLU 172 | - | VdWContact |
| GLY 35 | CX.5 | GLU 174 | - | VdWContact |
| ASN 36 | cxb1.1 | GLU 94 | - | Hydrophobic |
| ASN 36 | cxb1.1 | GLU 94 | - | VdWContact |
| GLY 37 | cxb1.2 | GLU 174 | - | HBDonor |
| GLY 37 | cxb1.2 | GLU 174 | - | VdWContact |
| CYS 38 | cxb1.5 | GLU 174 | - | HBDonor |
| CYS 38 | cxb1.5 | GLU 174 | - | VdWContact |
| PRO 39 | cxb1.6 | LEU 176 | 45.51x51 | Hydrophobic |
| PRO 39 | cxb1.6 | LEU 176 | 45.51x51 | VdWContact |
| ILE 44 | cxb1.14 | TYR 22 | - | Hydrophobic |
| ILE 44 | cxb1.14 | TYR 22 | - | VdWContact |
| TRP 46 | cxb1.16 | TYR 22 | - | Hydrophobic |
| ILE 52 | B1.6 | TYR 22 | - | Hydrophobic |
| VAL 53 | B1.7 | LEU 17 | - | Hydrophobic |
| VAL 53 | B1.7 | LEU 17 | - | VdWContact |
| VAL 53 | B1.7 | ALA 20 | - | Hydrophobic |
| VAL 53 | B1.7 | ALA 20 | - | VdWContact |
| CYS 54 | b1b2.4 | ALA 20 | - | VdWContact |
| CYS 54 | b1b2.4 | TYR 22 | - | VdWContact |
