Interactions for 1B53 (chain B)


Structure details

3D view

NGL is a WebGL based 3D viewer powered by MMTF.



Chemokine diagram

S S Q C S K P G 30s-loop K R S R 40s-loop D P S E 50s-loopN-term M Q V S T A A L A V L L C T M A L C N Q F S A S L A A D T P T A C C F S Y T S R Q I P Q N F N-termC-term A C-term T E F Y D A I V I F L T A C V Q E W V Q K Y V S D L E L S
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions found in structure

Download list in excel
Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Ala 4 57 N-term SER 13 MIP-1A (A) VdWContact
Asp 5 58 N-term GLN 48 MIP-1A (A) VdWContact
Pro 7 60 N-term ILE 40 MIP-1A (A) Hydrophobic
Pro 7 60 N-term ALA 9 MIP-1A (A) Hydrophobic
Pro 7 60 N-term CYS 10 MIP-1A (A) VdWContact
Thr 8 61 N-term PHE 12 MIP-1A (A) Hydrophobic
Thr 8 61 N-term PHE 12 MIP-1A (A) VdWContact
Thr 8 61 N-term CYS 10 MIP-1A (A) VdWContact
Ala 9 62 N-term PRO 7 MIP-1A (A) Hydrophobic
Cys 10 63 CX CYS 34 MIP-1A (A) VdWContact
Cys 10 63 CX CYS 10 MIP-1A (A) VdWContact
Phe 12 68 N-loop GLN 33 MIP-1A (A) Hydrophobic
Phe 12 68 N-loop GLN 33 MIP-1A (A) VdWContact
Phe 12 68 N-loop THR 8 MIP-1A (A) Hydrophobic
Phe 12 68 N-loop THR 8 MIP-1A (A) VdWContact
Ser 13 69 N-loop ALA 4 MIP-1A (A) VdWContact
Gln 33 94 30s-loop PHE 12 MIP-1A (A) Hydrophobic
Gln 33 94 30s-loop PHE 12 MIP-1A (A) VdWContact
Cys 34 95 30s-loop CYS 34 MIP-1A (A) VdWContact
Ile 40 102 B2 PRO 7 MIP-1A (A) Hydrophobic
Arg 47 114 40s-loop ASP 5 MIP-1A (A) Hydrophobic
Arg 47 114 40s-loop ASP 5 MIP-1A (A) Cationic
Arg 47 114 40s-loop ASP 5 MIP-1A (A) VdWContact
Gln 48 115 B3 PRO 7 MIP-1A (A) VdWContact
Gln 48 115 B3 THR 6 MIP-1A (A) HBAcceptor
Gln 48 115 B3 THR 6 MIP-1A (A) VdWContact
Gln 48 115 B3 ASP 5 MIP-1A (A) Hydrophobic
Gln 48 115 B3 ASP 5 MIP-1A (A) VdWContact
Val 49 116 B3 ASP 5 MIP-1A (A) Hydrophobic

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)