Interactions for 1M8A (chain A)
Structure details
- PDB ID: 1M8A open_in_new
- Protein: CCL20_HUMAN
- Organism: Homo sapiens
- UniProt ID: P78556 open_in_new
- Method: X-ray
- Resolution: 1.7 Å
- Date: July 31, 2002
- Reference: 10.1074/JBC.M203907200 open_in_new
- State: dimer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Asp 5 | 62 | N-term | LYS 44 | Small inducible cytokine A20 (B) | Anionic |
| Val 21 | 84 | B1 | ARG 25 | Small inducible cytokine A20 (B) | HBAcceptor |
| Val 21 | 84 | B1 | ARG 25 | Small inducible cytokine A20 (B) | VdWContact |
| Val 21 | 84 | B1 | THR 24 | Small inducible cytokine A20 (B) | Hydrophobic |
| Gly 22 | 85 | B1 | THR 24 | Small inducible cytokine A20 (B) | VdWContact |
| Gly 22 | 85 | B1 | PHE 23 | Small inducible cytokine A20 (B) | VdWContact |
| Phe 23 | 86 | B1 | LEU 63 | Small inducible cytokine A20 (B) | Hydrophobic |
| Phe 23 | 86 | B1 | GLY 22 | Small inducible cytokine A20 (B) | VdWContact |
| Phe 23 | 86 | B1 | PHE 23 | Small inducible cytokine A20 (B) | Hydrophobic |
| Phe 23 | 86 | B1 | PHE 23 | Small inducible cytokine A20 (B) | HBDonor |
| Phe 23 | 86 | B1 | PHE 23 | Small inducible cytokine A20 (B) | VdWContact |
| Thr 24 | 87 | B1 | HIS 40 | Small inducible cytokine A20 (B) | Hydrophobic |
| Thr 24 | 87 | B1 | VAL 21 | Small inducible cytokine A20 (B) | Hydrophobic |
| Thr 24 | 87 | B1 | VAL 21 | Small inducible cytokine A20 (B) | VdWContact |
| Thr 24 | 87 | B1 | GLY 22 | Small inducible cytokine A20 (B) | VdWContact |
| Arg 25 | 88 | B1 | LEU 63 | Small inducible cytokine A20 (B) | VdWContact |
| Arg 25 | 88 | B1 | VAL 21 | Small inducible cytokine A20 (B) | HBDonor |
| Arg 25 | 88 | B1 | VAL 21 | Small inducible cytokine A20 (B) | VdWContact |
| Arg 25 | 88 | B1 | LYS 65 | Small inducible cytokine A20 (B) | VdWContact |
| Glu 30 | 93 | 30s-loop | LYS 42 | Small inducible cytokine A20 (B) | HBAcceptor |
| Glu 30 | 93 | 30s-loop | LYS 42 | Small inducible cytokine A20 (B) | Anionic |
| Glu 30 | 93 | 30s-loop | LYS 42 | Small inducible cytokine A20 (B) | VdWContact |
| His 40 | 104 | B2 | THR 24 | Small inducible cytokine A20 (B) | HBDonor |
| His 40 | 104 | B2 | THR 24 | Small inducible cytokine A20 (B) | VdWContact |
| His 40 | 104 | B2 | HIS 40 | Small inducible cytokine A20 (B) | Hydrophobic |
| Leu 63 | 132 | Helix | ARG 25 | Small inducible cytokine A20 (B) | HBAcceptor |
| Leu 63 | 132 | Helix | ARG 25 | Small inducible cytokine A20 (B) | VdWContact |
| Leu 63 | 132 | Helix | PHE 23 | Small inducible cytokine A20 (B) | Hydrophobic |
| Ser 64 | 133 | Helix | SER 64 | Small inducible cytokine A20 (B) | HBAcceptor |
| Ser 64 | 133 | Helix | SER 64 | Small inducible cytokine A20 (B) | VdWContact |
| Lys 65 | 134 | Helix | ARG 25 | Small inducible cytokine A20 (B) | VdWContact |
Ligand interaction network
IPA_A_102
IPA_A_104
IPA_A_106
IPA_A_107
IPA_A_108
IPA_A_109
IPA_A_110
IPA_B_101
IPA_B_103
IPA_B_105
Interaction pattern search
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