Interactions for 1QE6 (chain D)
Structure details
- PDB ID: 1QE6 open_in_new
- Protein: CXCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10145 open_in_new
- Method: X-ray
- Resolution: 2.35 Å
- Date: March 22, 2000
- Reference: 2-S open_in_new
- State: dimer
Chemokine diagram
Pick color:
, 'snake_.png', {scale: 3});){kind=link}
, 'snake_.jpg', {scale: 3});){kind=link}
Interactions found in structure
Download list in excel
| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Lys 20 | 81 | N-loop | CYS 5 | INTERLEUKIN-8 VARIANT (B) | Cationic |
| Lys 23 | 84 | B1 | GLU 29 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Lys 23 | 84 | B1 | GLU 29 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 24 | 85 | B1 | VAL 27 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 24 | 85 | B1 | ARG 26 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Glu 24 | 85 | B1 | ARG 26 | INTERLEUKIN-8 VARIANT (C) | Anionic |
| Glu 24 | 85 | B1 | ARG 26 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 24 | 85 | B1 | ILE 28 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Glu 24 | 85 | B1 | ILE 28 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Leu 25 | 86 | B1 | ARG 26 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Leu 25 | 86 | B1 | VAL 27 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Leu 25 | 86 | B1 | VAL 27 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Leu 25 | 86 | B1 | VAL 27 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Leu 25 | 86 | B1 | VAL 27 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Arg 26 | 87 | B1 | GLU 24 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Arg 26 | 87 | B1 | GLU 24 | INTERLEUKIN-8 VARIANT (C) | Cationic |
| Arg 26 | 87 | B1 | GLU 24 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Arg 26 | 87 | B1 | LEU 25 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Arg 26 | 87 | B1 | ARG 26 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Arg 26 | 87 | B1 | ARG 26 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Val 27 | 88 | B1 | GLU 24 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Val 27 | 88 | B1 | PHE 65 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Val 27 | 88 | B1 | LEU 25 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Val 27 | 88 | B1 | LEU 25 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Val 27 | 88 | B1 | LEU 25 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Val 27 | 88 | B1 | LEU 25 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Val 27 | 88 | B1 | LEU 66 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Val 27 | 88 | B1 | ALA 69 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Ile 28 | 89 | B1 | GLU 24 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Ile 28 | 89 | B1 | GLU 24 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 29 | 90 | 30s-loop | LYS 23 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Glu 29 | 90 | 30s-loop | LYS 23 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 29 | 90 | 30s-loop | PHE 65 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Glu 29 | 90 | 30s-loop | ARG 68 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Glu 29 | 90 | 30s-loop | ARG 68 | INTERLEUKIN-8 VARIANT (C) | Anionic |
| Glu 29 | 90 | 30s-loop | ARG 68 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 29 | 90 | 30s-loop | ALA 69 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Ser 30 | 91 | 30s-loop | SER 72 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Ser 30 | 91 | 30s-loop | SER 72 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Thr 37 | 99 | 30s-loop | SER 72 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Thr 37 | 99 | 30s-loop | SER 72 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Thr 37 | 99 | 30s-loop | ALA 69 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Thr 37 | 99 | 30s-loop | ALA 69 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Thr 37 | 99 | 30s-loop | ALA 69 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Lys 54 | 121 | 50s-loop | SER 72 | INTERLEUKIN-8 VARIANT (C) | Cationic |
| Lys 54 | 121 | 50s-loop | SER 72 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Lys 54 | 121 | 50s-loop | ASN 71 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Gln 59 | 126 | Helix | GLU 70 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Val 62 | 129 | Helix | LEU 66 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Val 62 | 129 | Helix | LEU 66 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Phe 65 | 132 | Helix | VAL 27 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Phe 65 | 132 | Helix | GLU 29 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Leu 66 | 133 | Helix | VAL 62 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Leu 66 | 133 | Helix | VAL 27 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Arg 68 | 135 | Helix | GLU 29 | INTERLEUKIN-8 VARIANT (C) | HBDonor |
| Arg 68 | 135 | Helix | GLU 29 | INTERLEUKIN-8 VARIANT (C) | Cationic |
| Arg 68 | 135 | Helix | GLU 29 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Ala 69 | 136 | C-term | THR 37 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Ala 69 | 136 | C-term | THR 37 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Ala 69 | 136 | C-term | THR 37 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Ala 69 | 136 | C-term | VAL 27 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Ala 69 | 136 | C-term | GLU 29 | INTERLEUKIN-8 VARIANT (C) | Hydrophobic |
| Ala 69 | 136 | C-term | GLU 29 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Glu 70 | 137 | C-term | LYS 54 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Ser 72 | 139 | C-term | LYS 20 | INTERLEUKIN-8 VARIANT (A) | HBAcceptor |
| Ser 72 | 139 | C-term | LYS 20 | INTERLEUKIN-8 VARIANT (A) | Anionic |
| Ser 72 | 139 | C-term | LYS 20 | INTERLEUKIN-8 VARIANT (A) | VdWContact |
| Ser 72 | 139 | C-term | SER 30 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
| Ser 72 | 139 | C-term | LYS 54 | INTERLEUKIN-8 VARIANT (C) | HBAcceptor |
| Ser 72 | 139 | C-term | LYS 54 | INTERLEUKIN-8 VARIANT (C) | Anionic |
| Ser 72 | 139 | C-term | LYS 54 | INTERLEUKIN-8 VARIANT (C) | VdWContact |
Ligand interaction network
SO4_B_134
SO4_D_101
SO4_D_190
Interaction pattern search
Search complexes with similar interaction patterns:
