Interactions for 1QG7 (chain B)


Structure details

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Chemokine diagram

N T P N C A L Q 30s-loop K N N N R 40s-loop D P K L 50s-loopN-term M N A K V V V V L V L V L T A L C L S D G K P V S L S Y R C P C R F F E S H V A R A N N-termC-term R F K M C-term L I K L H K V I V A R L I C V Q K W I Q E Y L E K A L N K
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
His 25 85 B1 LEU 29 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
His 25 85 B1 LEU 29 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
His 25 85 B1 LYS 27 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
His 25 85 B1 ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Leu 26 86 B1 LYS 27 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Leu 26 86 B1 ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBAcceptor
Leu 26 86 B1 ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBDonor
Leu 26 86 B1 ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Lys 27 87 B1 HIS 25 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Lys 27 87 B1 HIS 25 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) CationPi
Lys 27 87 B1 LEU 26 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ile 28 88 B1 LEU 62 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ile 28 88 B1 LEU 62 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ile 28 88 B1 ALA 65 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ile 28 88 B1 LEU 26 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBAcceptor
Ile 28 88 B1 LEU 26 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBDonor
Ile 28 88 B1 LEU 26 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ile 28 88 B1 TYR 61 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ile 28 88 B1 TYR 61 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBAcceptor
Ile 28 88 B1 TYR 61 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ile 28 88 B1 ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 29 89 B1 HIS 25 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Asn 30 90 30s-loop LYS 24 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBDonor
Asn 30 90 30s-loop LYS 24 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Asn 30 90 30s-loop TYR 61 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Asn 30 90 30s-loop TYR 61 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Asn 30 90 30s-loop ARG 20 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBAcceptor
Asn 30 90 30s-loop ARG 20 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Asn 30 90 30s-loop VAL 23 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBDonor
Asn 30 90 30s-loop VAL 23 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Gln 37 100 30s-loop ALA 65 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Gln 37 100 30s-loop ALA 65 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ile 38 101 B2 ALA 65 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ile 38 101 B2 LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Lys 54 121 50s-loop LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBDonor
Lys 54 121 50s-loop LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Lys 54 121 50s-loop ASN 67 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Cationic
Lys 54 121 50s-loop ASN 67 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ile 58 125 Helix LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Gln 59 126 Helix LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Tyr 61 128 Helix LEU 29 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Tyr 61 128 Helix ASN 30 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Tyr 61 128 Helix ASN 30 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBAcceptor
Tyr 61 128 Helix ASN 30 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Tyr 61 128 Helix ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Tyr 61 128 Helix ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBDonor
Tyr 61 128 Helix ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Leu 62 129 Helix LEU 62 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 62 129 Helix LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 62 129 Helix ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 62 129 Helix ILE 28 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Glu 63 130 Helix LEU 36 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ala 65 132 Helix ILE 38 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ala 65 132 Helix GLN 59 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) HBAcceptor
Ala 65 132 Helix GLN 59 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ala 65 132 Helix LEU 62 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ala 65 132 Helix LEU 62 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Ala 65 132 Helix ILE 58 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Ala 65 132 Helix LEU 36 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 66 133 Helix LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 66 133 Helix LEU 66 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact
Leu 66 133 Helix LEU 62 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) Hydrophobic
Leu 66 133 Helix GLN 59 STROMAL CELL-DERIVED FACTOR 1 ALPHA (A) VdWContact

Ligand interaction network

SO4_A_68

SO4_B_68

SO4_B_69

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