Interactions for 1U4L (chain B)
Structure details
- PDB ID: 1U4L open_in_new
- Protein: CCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13501 open_in_new
- Method: X-ray
- Resolution: 2.0 Å
- Date: Nov. 9, 2004
- Reference: 10.1016/J.STR.2004.08.014 open_in_new
- State: dimer
Chemokine diagram
Pick color:
, 'snake_.png', {scale: 3});){kind=link}
, 'snake_.jpg', {scale: 3});){kind=link}
Interactions found in structure
Download list in excel
| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Ser 4 | 57 | N-term | GLN 48 | Small inducible cytokine A5 (A) | HBAcceptor |
| Ser 4 | 57 | N-term | GLN 48 | Small inducible cytokine A5 (A) | VdWContact |
| Ser 4 | 57 | N-term | ARG 47 | Small inducible cytokine A5 (A) | VdWContact |
| Ser 5 | 58 | N-term | GLN 48 | Small inducible cytokine A5 (A) | VdWContact |
| Asp 6 | 59 | N-term | GLN 48 | Small inducible cytokine A5 (A) | HBDonor |
| Asp 6 | 59 | N-term | GLN 48 | Small inducible cytokine A5 (A) | VdWContact |
| Thr 7 | 60 | N-term | PRO 9 | Small inducible cytokine A5 (A) | Hydrophobic |
| Thr 7 | 60 | N-term | VAL 40 | Small inducible cytokine A5 (A) | Hydrophobic |
| Thr 8 | 61 | N-term | PHE 12 | Small inducible cytokine A5 (A) | Hydrophobic |
| Thr 8 | 61 | N-term | PHE 12 | Small inducible cytokine A5 (A) | VdWContact |
| Thr 8 | 61 | N-term | CYS 10 | Small inducible cytokine A5 (A) | HBAcceptor |
| Thr 8 | 61 | N-term | CYS 10 | Small inducible cytokine A5 (A) | HBDonor |
| Thr 8 | 61 | N-term | CYS 10 | Small inducible cytokine A5 (A) | VdWContact |
| Pro 9 | 62 | N-term | THR 7 | Small inducible cytokine A5 (A) | Hydrophobic |
| Cys 10 | 63 | CX | THR 8 | Small inducible cytokine A5 (A) | HBAcceptor |
| Cys 10 | 63 | CX | THR 8 | Small inducible cytokine A5 (A) | HBDonor |
| Cys 10 | 63 | CX | THR 8 | Small inducible cytokine A5 (A) | VdWContact |
| Cys 10 | 63 | CX | THR 7 | Small inducible cytokine A5 (A) | VdWContact |
| Phe 12 | 68 | N-loop | LYS 33 | Small inducible cytokine A5 (A) | Hydrophobic |
| Phe 12 | 68 | N-loop | LYS 33 | Small inducible cytokine A5 (A) | VdWContact |
| Phe 12 | 68 | N-loop | THR 8 | Small inducible cytokine A5 (A) | Hydrophobic |
| Phe 12 | 68 | N-loop | CYS 10 | Small inducible cytokine A5 (A) | VdWContact |
| Phe 12 | 68 | N-loop | TYR 3 | Small inducible cytokine A5 (A) | Hydrophobic |
| Ala 13 | 69 | N-loop | SER 4 | Small inducible cytokine A5 (A) | VdWContact |
| Ala 13 | 69 | N-loop | TYR 3 | Small inducible cytokine A5 (A) | Hydrophobic |
| Ala 22 | 81 | N-loop | UNL 1 | HEPARIN DISACCHARIDE I-S, (None) | VdWContact |
| Ile 24 | 83 | B1 | UNL 1 | HEPARIN DISACCHARIDE I-S, (None) | VdWContact |
| Lys 33 | 94 | 30s-loop | PHE 12 | Small inducible cytokine A5 (A) | Hydrophobic |
| Val 40 | 102 | B2 | THR 7 | Small inducible cytokine A5 (A) | Hydrophobic |
| Arg 44 | 106 | 40s-loop | UNL 1 | HEPARIN DISACCHARIDE I-S, (None) | HBAcceptor |
| Arg 44 | 106 | 40s-loop | UNL 1 | HEPARIN DISACCHARIDE I-S, (None) | Anionic |
| Arg 44 | 106 | 40s-loop | UNL 1 | HEPARIN DISACCHARIDE I-S, (None) | VdWContact |
| Arg 47 | 114 | 40s-loop | ASP 6 | Small inducible cytokine A5 (A) | Cationic |
| Arg 47 | 114 | 40s-loop | ASP 6 | Small inducible cytokine A5 (A) | VdWContact |
| Gln 48 | 115 | B3 | THR 7 | Small inducible cytokine A5 (A) | Hydrophobic |
| Gln 48 | 115 | B3 | THR 7 | Small inducible cytokine A5 (A) | HBAcceptor |
| Gln 48 | 115 | B3 | THR 7 | Small inducible cytokine A5 (A) | VdWContact |
| Gln 48 | 115 | B3 | ASP 6 | Small inducible cytokine A5 (A) | VdWContact |
| Cys 50 | 117 | B3 | SER 5 | Small inducible cytokine A5 (A) | HBDonor |
| Cys 50 | 117 | B3 | SER 5 | Small inducible cytokine A5 (A) | VdWContact |
Ligand interaction network
ACY_B_201
SGN_C_1_UAP_C_2
Interaction pattern search
Search complexes with similar interaction patterns:
