Interactions for 2BDN (chain A)
Structure details
- PDB ID: 2BDN open_in_new
- Protein: CCL2_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13500 open_in_new
- Method: X-ray
- Resolution: 2.53 Å
- Date: June 13, 2006
- Reference: 10.1093/PROTEIN/GZL015 open_in_new
- State: monomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Arg 30 | 88 | B1 | PHE 101 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Arg 30 | 88 | B1 | PHE 101 | Antibody heavy chain 11K2 (H) | VdWContact |
| Thr 32 | 90 | 30s-loop | ARG 98 | Antibody heavy chain 11K2 (H) | HBAcceptor |
| Thr 32 | 90 | 30s-loop | ARG 98 | Antibody heavy chain 11K2 (H) | VdWContact |
| Thr 32 | 90 | 30s-loop | PHE 101 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Thr 32 | 90 | 30s-loop | PHE 101 | Antibody heavy chain 11K2 (H) | VdWContact |
| Thr 32 | 90 | 30s-loop | PHE 103 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Ser 34 | 92 | 30s-loop | TYR 106 | Antibody heavy chain 11K2 (H) | VdWContact |
| Ser 34 | 92 | 30s-loop | GLU 1 | Antibody heavy chain 11K2 (H) | HBDonor |
| Ser 34 | 92 | 30s-loop | GLU 1 | Antibody heavy chain 11K2 (H) | VdWContact |
| Lys 38 | 97 | 30s-loop | ASP 31 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Lys 38 | 97 | 30s-loop | ASP 31 | Antibody heavy chain 11K2 (H) | Cationic |
| Glu 39 | 99 | 30s-loop | ARG 98 | Antibody heavy chain 11K2 (H) | Anionic |
| Glu 39 | 99 | 30s-loop | VAL 100 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Glu 39 | 99 | 30s-loop | VAL 100 | Antibody heavy chain 11K2 (H) | HBAcceptor |
| Glu 39 | 99 | 30s-loop | VAL 100 | Antibody heavy chain 11K2 (H) | VdWContact |
| Glu 39 | 99 | 30s-loop | THR 32 | Antibody heavy chain 11K2 (H) | HBAcceptor |
| Glu 39 | 99 | 30s-loop | THR 32 | Antibody heavy chain 11K2 (H) | VdWContact |
| Glu 39 | 99 | 30s-loop | PHE 101 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Ala 40 | 100 | 30s-loop | PHE 101 | Antibody heavy chain 11K2 (H) | VdWContact |
| Val 41 | 101 | B2 | PHE 101 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Val 41 | 101 | B2 | PHE 101 | Antibody heavy chain 11K2 (H) | VdWContact |
| Pro 55 | 120 | 50s-loop | VAL 100 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Pro 55 | 120 | 50s-loop | VAL 100 | Antibody heavy chain 11K2 (H) | VdWContact |
| Pro 55 | 120 | 50s-loop | PHE 101 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Lys 56 | 121 | 50s-loop | ASP 52 | Antibody heavy chain 11K2 (H) | HBDonor |
| Lys 56 | 121 | 50s-loop | ASP 52 | Antibody heavy chain 11K2 (H) | Cationic |
| Lys 56 | 121 | 50s-loop | ASP 52 | Antibody heavy chain 11K2 (H) | VdWContact |
| Lys 56 | 121 | 50s-loop | TYR 33 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Lys 56 | 121 | 50s-loop | VAL 100 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Lys 56 | 121 | 50s-loop | THR 32 | Antibody heavy chain 11K2 (H) | HBDonor |
| Lys 56 | 121 | 50s-loop | THR 32 | Antibody heavy chain 11K2 (H) | VdWContact |
| Lys 56 | 121 | 50s-loop | LYS 30 | Antibody heavy chain 11K2 (H) | VdWContact |
| Met 64 | 129 | Helix | PHE 101 | Antibody heavy chain 11K2 (H) | Hydrophobic |
| Asp 65 | 130 | Helix | TRP 92 | Antibody light chain 11K2 (L) | Hydrophobic |
| Asp 65 | 130 | Helix | ARG 32 | Antibody light chain 11K2 (L) | Anionic |
| Asp 65 | 130 | Helix | ARG 32 | Antibody light chain 11K2 (L) | VdWContact |
| Asp 68 | 133 | Helix | TYR 30 | Antibody light chain 11K2 (L) | Hydrophobic |
| Asp 68 | 133 | Helix | TRP 92 | Antibody light chain 11K2 (L) | Hydrophobic |
| Asp 68 | 133 | Helix | ARG 32 | Antibody light chain 11K2 (L) | HBAcceptor |
| Asp 68 | 133 | Helix | ARG 32 | Antibody light chain 11K2 (L) | Anionic |
| Asp 68 | 133 | Helix | ARG 32 | Antibody light chain 11K2 (L) | VdWContact |
| Lys 69 | 134 | Helix | TYR 30 | Antibody light chain 11K2 (L) | Hydrophobic |
| Lys 69 | 134 | Helix | TYR 30 | Antibody light chain 11K2 (L) | VdWContact |
| Lys 69 | 134 | Helix | TRP 92 | Antibody light chain 11K2 (L) | VdWContact |
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