Interactions for 2FJ2 (chain C)
Structure details
- PDB ID: 2FJ2 open_in_new
- Protein: CXCL2_HHV8P
- Organism: Human herpesvirus 8 type P
- UniProt ID: Q98157 open_in_new
- Method: X-ray
- Resolution: 2.3 Å
- Date: Dec. 26, 2006
- Reference: 10.1002/PROT.21172 open_in_new
- State: dimer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Ser 4 | 56 | N-term | VAL 50 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| His 6 | 58 | N-term | VAL 50 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| His 6 | 58 | N-term | GLY 14 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| His 6 | 58 | N-term | CYS 51 | Viral macrophage inflammatory protein-II (D) | HBAcceptor |
| His 6 | 58 | N-term | CYS 51 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Pro 8 | 60 | N-term | ILE 41 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Pro 8 | 60 | N-term | ILE 41 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Pro 8 | 60 | N-term | LYS 10 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Pro 8 | 60 | N-term | LYS 10 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Asp 9 | 61 | N-term | CYS 11 | Viral macrophage inflammatory protein-II (D) | HBAcceptor |
| Asp 9 | 61 | N-term | CYS 11 | Viral macrophage inflammatory protein-II (D) | HBDonor |
| Asp 9 | 61 | N-term | CYS 11 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Asp 9 | 61 | N-term | LEU 13 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Lys 10 | 62 | N-term | LYS 10 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Lys 10 | 62 | N-term | PRO 8 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Cys 11 | 63 | CX | CYS 11 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Cys 11 | 63 | CX | ASP 9 | Viral macrophage inflammatory protein-II (D) | HBAcceptor |
| Cys 11 | 63 | CX | ASP 9 | Viral macrophage inflammatory protein-II (D) | HBDonor |
| Cys 11 | 63 | CX | ASP 9 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Leu 13 | 68 | N-loop | SER 32 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Leu 13 | 68 | N-loop | LEU 34 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Leu 13 | 68 | N-loop | ASP 9 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Leu 13 | 68 | N-loop | ASP 9 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Tyr 15 | 70 | N-loop | HIS 6 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Arg 18 | 73 | N-loop | TRP 5 | Viral macrophage inflammatory protein-II (D) | HBDonor |
| Arg 18 | 73 | N-loop | TRP 5 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Ser 32 | 90 | 30s-loop | LEU 13 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Leu 34 | 94 | 30s-loop | LEU 13 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Ser 36 | 96 | 30s-loop | SER 36 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Gln 49 | 115 | B3 | PRO 8 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Val 50 | 116 | B3 | HIS 6 | Viral macrophage inflammatory protein-II (D) | Hydrophobic |
| Val 50 | 116 | B3 | HIS 6 | Viral macrophage inflammatory protein-II (D) | VdWContact |
| Cys 51 | 117 | B3 | HIS 6 | Viral macrophage inflammatory protein-II (D) | HBDonor |
| Cys 51 | 117 | B3 | HIS 6 | Viral macrophage inflammatory protein-II (D) | VdWContact |
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