Interactions for 2JP1 (chain B)
Structure details
- PDB ID: 2JP1 open_in_new
- Protein: XCL1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P47992 open_in_new
- Method: Solution nmr
- Resolution: 0.0 Å
- Date: March 11, 2008
- Reference: 10.1073/PNAS.0709518105 open_in_new
- State: dimer
Chemokine diagram
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Interactions found in structure
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Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
---|---|---|---|---|---|
Ser 6 | 58 | N-term | THR 16 | Lymphotactin (A) | VdWContact |
Asp 7 | 59 | N-term | THR 16 | Lymphotactin (A) | VdWContact |
Asp 7 | 59 | N-term | GLN 17 | Lymphotactin (A) | Hydrophobic |
Asp 7 | 59 | N-term | GLN 17 | Lymphotactin (A) | HBAcceptor |
Asp 7 | 59 | N-term | GLN 17 | Lymphotactin (A) | VdWContact |
Thr 10 | 62 | N-term | LEU 14 | Lymphotactin (A) | Hydrophobic |
Thr 10 | 62 | N-term | LEU 14 | Lymphotactin (A) | VdWContact |
Val 12 | 68 | N-loop | LEU 14 | Lymphotactin (A) | Hydrophobic |
Val 12 | 68 | N-loop | VAL 12 | Lymphotactin (A) | Hydrophobic |
Val 12 | 68 | N-loop | VAL 12 | Lymphotactin (A) | VdWContact |
Leu 14 | 70 | N-loop | THR 10 | Lymphotactin (A) | Hydrophobic |
Leu 14 | 70 | N-loop | THR 10 | Lymphotactin (A) | VdWContact |
Leu 14 | 70 | N-loop | ALA 49 | Lymphotactin (A) | Hydrophobic |
Leu 14 | 70 | N-loop | ALA 49 | Lymphotactin (A) | VdWContact |
Leu 14 | 70 | N-loop | VAL 12 | Lymphotactin (A) | Hydrophobic |
Leu 14 | 70 | N-loop | VAL 47 | Lymphotactin (A) | Hydrophobic |
Thr 15 | 71 | N-loop | THR 10 | Lymphotactin (A) | HBAcceptor |
Thr 15 | 71 | N-loop | THR 10 | Lymphotactin (A) | VdWContact |
Thr 15 | 71 | N-loop | SER 6 | Lymphotactin (A) | HBDonor |
Thr 15 | 71 | N-loop | SER 6 | Lymphotactin (A) | VdWContact |
Thr 15 | 71 | N-loop | VAL 5 | Lymphotactin (A) | Hydrophobic |
Thr 16 | 72 | N-loop | ALA 49 | Lymphotactin (A) | Hydrophobic |
Thr 16 | 72 | N-loop | ALA 49 | Lymphotactin (A) | VdWContact |
Thr 16 | 72 | N-loop | LYS 8 | Lymphotactin (A) | VdWContact |
Thr 16 | 72 | N-loop | PRO 51 | Lymphotactin (A) | Hydrophobic |
Thr 16 | 72 | N-loop | PRO 51 | Lymphotactin (A) | VdWContact |
Gln 17 | 73 | N-loop | ASP 7 | Lymphotactin (A) | VdWContact |
Arg 18 | 74 | N-loop | PRO 51 | Lymphotactin (A) | Hydrophobic |
Arg 18 | 74 | N-loop | GLN 52 | Lymphotactin (A) | VdWContact |
Arg 18 | 74 | N-loop | LEU 34 | Lymphotactin (A) | VdWContact |
Leu 19 | 75 | N-loop | SER 33 | Lymphotactin (A) | VdWContact |
Leu 19 | 75 | N-loop | GLN 52 | Lymphotactin (A) | VdWContact |
Lys 25 | 84 | B1 | GLU 31 | Lymphotactin (A) | Hydrophobic |
Lys 25 | 84 | B1 | GLU 31 | Lymphotactin (A) | HBDonor |
Lys 25 | 84 | B1 | GLU 31 | Lymphotactin (A) | Cationic |
Lys 25 | 84 | B1 | GLU 31 | Lymphotactin (A) | VdWContact |
Tyr 27 | 86 | B1 | GLU 31 | Lymphotactin (A) | HBDonor |
Tyr 27 | 86 | B1 | GLU 31 | Lymphotactin (A) | VdWContact |
Tyr 27 | 86 | B1 | ILE 29 | Lymphotactin (A) | Hydrophobic |
Tyr 27 | 86 | B1 | ILE 29 | Lymphotactin (A) | VdWContact |
Ile 29 | 88 | B1 | ILE 38 | Lymphotactin (A) | Hydrophobic |
Ile 29 | 88 | B1 | ILE 38 | Lymphotactin (A) | VdWContact |
Ile 29 | 88 | B1 | ILE 29 | Lymphotactin (A) | Hydrophobic |
Ile 29 | 88 | B1 | ILE 29 | Lymphotactin (A) | VdWContact |
Ile 29 | 88 | B1 | TYR 27 | Lymphotactin (A) | Hydrophobic |
Ile 29 | 88 | B1 | TYR 27 | Lymphotactin (A) | VdWContact |
Glu 31 | 90 | 30s-loop | ILE 40 | Lymphotactin (A) | Hydrophobic |
Glu 31 | 90 | 30s-loop | ILE 40 | Lymphotactin (A) | VdWContact |
Glu 31 | 90 | 30s-loop | LYS 25 | Lymphotactin (A) | Hydrophobic |
Glu 31 | 90 | 30s-loop | LYS 25 | Lymphotactin (A) | HBAcceptor |
Glu 31 | 90 | 30s-loop | LYS 25 | Lymphotactin (A) | Anionic |
Glu 31 | 90 | 30s-loop | LYS 25 | Lymphotactin (A) | VdWContact |
Glu 31 | 90 | 30s-loop | TYR 27 | Lymphotactin (A) | Hydrophobic |
Glu 31 | 90 | 30s-loop | TYR 27 | Lymphotactin (A) | HBAcceptor |
Glu 31 | 90 | 30s-loop | TYR 27 | Lymphotactin (A) | VdWContact |
Ser 33 | 96 | 30s-loop | LEU 19 | Lymphotactin (A) | VdWContact |
Leu 34 | 97 | 30s-loop | ARG 18 | Lymphotactin (A) | VdWContact |
Leu 34 | 97 | 30s-loop | ILE 40 | Lymphotactin (A) | Hydrophobic |
Leu 34 | 97 | 30s-loop | ILE 40 | Lymphotactin (A) | VdWContact |
Ala 36 | 100 | 30s-loop | LEU 45 | Lymphotactin (A) | Hydrophobic |
Ala 36 | 100 | 30s-loop | ILE 38 | Lymphotactin (A) | Hydrophobic |
Ile 38 | 102 | B2 | ALA 36 | Lymphotactin (A) | Hydrophobic |
Ile 38 | 102 | B2 | ILE 38 | Lymphotactin (A) | Hydrophobic |
Ile 38 | 102 | B2 | ILE 38 | Lymphotactin (A) | VdWContact |
Ile 38 | 102 | B2 | ILE 29 | Lymphotactin (A) | Hydrophobic |
Ile 38 | 102 | B2 | ILE 29 | Lymphotactin (A) | VdWContact |
Ile 40 | 104 | B2 | GLU 31 | Lymphotactin (A) | Hydrophobic |
Ile 40 | 104 | B2 | GLU 31 | Lymphotactin (A) | VdWContact |
Ile 40 | 104 | B2 | LEU 34 | Lymphotactin (A) | Hydrophobic |
Ile 40 | 104 | B2 | LEU 34 | Lymphotactin (A) | VdWContact |
Leu 45 | 114 | 40s-loop | ALA 36 | Lymphotactin (A) | Hydrophobic |
Leu 45 | 114 | 40s-loop | ALA 49 | Lymphotactin (A) | Hydrophobic |
Leu 45 | 114 | 40s-loop | ALA 49 | Lymphotactin (A) | VdWContact |
Leu 45 | 114 | 40s-loop | VAL 47 | Lymphotactin (A) | Hydrophobic |
Leu 45 | 114 | 40s-loop | VAL 47 | Lymphotactin (A) | VdWContact |
Val 47 | 116 | B3 | LEU 45 | Lymphotactin (A) | Hydrophobic |
Val 47 | 116 | B3 | LEU 45 | Lymphotactin (A) | VdWContact |
Val 47 | 116 | B3 | LEU 14 | Lymphotactin (A) | Hydrophobic |
Val 47 | 116 | B3 | VAL 47 | Lymphotactin (A) | Hydrophobic |
Val 47 | 116 | B3 | VAL 47 | Lymphotactin (A) | VdWContact |
Ala 49 | 118 | B3 | LEU 45 | Lymphotactin (A) | Hydrophobic |
Ala 49 | 118 | B3 | LEU 45 | Lymphotactin (A) | VdWContact |
Ala 49 | 118 | B3 | LEU 14 | Lymphotactin (A) | Hydrophobic |
Ala 49 | 118 | B3 | LEU 14 | Lymphotactin (A) | VdWContact |
Pro 51 | 120 | 50s-loop | THR 16 | Lymphotactin (A) | Hydrophobic |
Pro 51 | 120 | 50s-loop | THR 16 | Lymphotactin (A) | VdWContact |
Pro 51 | 120 | 50s-loop | GLN 17 | Lymphotactin (A) | Hydrophobic |
Pro 51 | 120 | 50s-loop | GLN 17 | Lymphotactin (A) | VdWContact |
Pro 51 | 120 | 50s-loop | ARG 18 | Lymphotactin (A) | VdWContact |
Gln 52 | 121 | 50s-loop | GLN 17 | Lymphotactin (A) | Hydrophobic |
Gln 52 | 121 | 50s-loop | GLN 17 | Lymphotactin (A) | HBDonor |
Gln 52 | 121 | 50s-loop | GLN 17 | Lymphotactin (A) | VdWContact |
Gln 52 | 121 | 50s-loop | ARG 18 | Lymphotactin (A) | VdWContact |