Interactions for 2N54 (chain A)
Structure details
- PDB ID: 2N54 open_in_new
- Protein: XCL1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P47992 open_in_new
- Method: Solution nmr
- Resolution: 0.0 Å
- Date: Oct. 7, 2015
- Reference: 10.1021/ACSCHEMBIO.5B00542 open_in_new
- State: dimer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Val 12 | 68 | N-loop | THR 216 | Lymphotactin (B) | Hydrophobic |
| Val 12 | 68 | N-loop | LEU 214 | Lymphotactin (B) | Hydrophobic |
| Val 12 | 68 | N-loop | LEU 214 | Lymphotactin (B) | VdWContact |
| Leu 14 | 70 | N-loop | VAL 212 | Lymphotactin (B) | Hydrophobic |
| Leu 14 | 70 | N-loop | VAL 212 | Lymphotactin (B) | VdWContact |
| Leu 14 | 70 | N-loop | LEU 214 | Lymphotactin (B) | Hydrophobic |
| Leu 14 | 70 | N-loop | LEU 214 | Lymphotactin (B) | VdWContact |
| Thr 16 | 72 | N-loop | VAL 212 | Lymphotactin (B) | Hydrophobic |
| Gln 17 | 73 | N-loop | THR 210 | Lymphotactin (B) | VdWContact |
| Gln 17 | 73 | N-loop | PRO 251 | Lymphotactin (B) | VdWContact |
| Gln 17 | 73 | N-loop | CYS 249 | Lymphotactin (B) | VdWContact |
| Leu 19 | 75 | N-loop | PRO 251 | Lymphotactin (B) | Hydrophobic |
| Ser 22 | 81 | N-loop | GLU 231 | Lymphotactin (B) | HBDonor |
| Ser 22 | 81 | N-loop | GLU 231 | Lymphotactin (B) | VdWContact |
| Arg 23 | 82 | N-loop | GLU 231 | Lymphotactin (B) | HBDonor |
| Arg 23 | 82 | N-loop | GLU 231 | Lymphotactin (B) | VdWContact |
| Lys 25 | 84 | B1 | GLU 231 | Lymphotactin (B) | Hydrophobic |
| Lys 25 | 84 | B1 | GLU 231 | Lymphotactin (B) | Cationic |
| Lys 25 | 84 | B1 | GLU 231 | Lymphotactin (B) | VdWContact |
| Tyr 27 | 86 | B1 | ILE 229 | Lymphotactin (B) | Hydrophobic |
| Tyr 27 | 86 | B1 | ILE 229 | Lymphotactin (B) | VdWContact |
| Ile 29 | 88 | B1 | ILE 238 | Lymphotactin (B) | Hydrophobic |
| Ile 29 | 88 | B1 | ILE 240 | Lymphotactin (B) | Hydrophobic |
| Ile 29 | 88 | B1 | ILE 240 | Lymphotactin (B) | VdWContact |
| Ile 29 | 88 | B1 | TYR 227 | Lymphotactin (B) | Hydrophobic |
| Glu 31 | 90 | 30s-loop | VAL 221 | Lymphotactin (B) | VdWContact |
| Glu 31 | 90 | 30s-loop | LYS 225 | Lymphotactin (B) | Hydrophobic |
| Glu 31 | 90 | 30s-loop | LYS 225 | Lymphotactin (B) | Anionic |
| Glu 31 | 90 | 30s-loop | LYS 225 | Lymphotactin (B) | VdWContact |
| Glu 31 | 90 | 30s-loop | ILE 240 | Lymphotactin (B) | Hydrophobic |
| Glu 31 | 90 | 30s-loop | ARG 223 | Lymphotactin (B) | HBAcceptor |
| Glu 31 | 90 | 30s-loop | ARG 223 | Lymphotactin (B) | VdWContact |
| Glu 31 | 90 | 30s-loop | SER 222 | Lymphotactin (B) | HBAcceptor |
| Glu 31 | 90 | 30s-loop | SER 222 | Lymphotactin (B) | VdWContact |
| Ile 38 | 102 | B2 | ILE 238 | Lymphotactin (B) | Hydrophobic |
| Ile 38 | 102 | B2 | ILE 238 | Lymphotactin (B) | VdWContact |
| Ile 40 | 104 | B2 | ILE 229 | Lymphotactin (B) | Hydrophobic |
| Ile 40 | 104 | B2 | ILE 229 | Lymphotactin (B) | VdWContact |
| Ile 40 | 104 | B2 | GLU 231 | Lymphotactin (B) | Hydrophobic |
| Leu 45 | 114 | 40s-loop | CYS 249 | Lymphotactin (B) | Hydrophobic |
| Leu 45 | 114 | 40s-loop | CYS 249 | Lymphotactin (B) | VdWContact |
| Leu 45 | 114 | 40s-loop | VAL 247 | Lymphotactin (B) | Hydrophobic |
| Leu 45 | 114 | 40s-loop | VAL 247 | Lymphotactin (B) | VdWContact |
| Val 47 | 116 | B3 | LEU 245 | Lymphotactin (B) | Hydrophobic |
| Val 47 | 116 | B3 | LEU 245 | Lymphotactin (B) | VdWContact |
| Val 47 | 116 | B3 | LEU 214 | Lymphotactin (B) | Hydrophobic |
| Ala 49 | 118 | B3 | LEU 245 | Lymphotactin (B) | VdWContact |
| Pro 51 | 120 | 50s-loop | GLN 217 | Lymphotactin (B) | VdWContact |
| Pro 51 | 120 | 50s-loop | LEU 219 | Lymphotactin (B) | Hydrophobic |
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