Interactions for 2NYZ (chain D)
Structure details
- PDB ID: 2NYZ open_in_new
- Protein: XCL1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P47992 open_in_new
- Method: X-ray
- Resolution: 2.6 Å
- Date: Dec. 25, 2007
- Reference: 10.1084/JEM.20071677 open_in_new
- State: monomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Lys 8 | 60 | N-term | ALA 275 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Lys 8 | 60 | N-term | ALA 275 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Arg 9 | 61 | N-term | LEU 273 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Arg 9 | 61 | N-term | PRO 274 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Arg 9 | 61 | N-term | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Arg 9 | 61 | N-term | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Thr 10 | 62 | N-term | LEU 273 | Hypothetical protein GAMMAHV.M3 (A) | HBAcceptor |
| Thr 10 | 62 | N-term | LEU 273 | Hypothetical protein GAMMAHV.M3 (A) | HBDonor |
| Thr 10 | 62 | N-term | LEU 273 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Thr 10 | 62 | N-term | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Val 12 | 68 | N-loop | LEU 273 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Val 12 | 68 | N-loop | THR 357 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Val 12 | 68 | N-loop | TYR 266 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Val 12 | 68 | N-loop | TYR 266 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Val 12 | 68 | N-loop | PRO 360 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Ser 13 | 69 | N-loop | SER 269 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Thr 15 | 71 | N-loop | VAL 270 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Thr 16 | 72 | N-loop | TYR 127 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Gln 17 | 73 | N-loop | THR 172 | Hypothetical protein GAMMAHV.M3 (B) | Hydrophobic |
| Gln 17 | 73 | N-loop | THR 172 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Gln 17 | 73 | N-loop | TYR 127 | Hypothetical protein GAMMAHV.M3 (B) | Hydrophobic |
| Gln 17 | 73 | N-loop | GLN 84 | Hypothetical protein GAMMAHV.M3 (B) | HBDonor |
| Gln 17 | 73 | N-loop | GLN 84 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Arg 18 | 74 | N-loop | ASP 141 | Hypothetical protein GAMMAHV.M3 (B) | Cationic |
| Arg 18 | 74 | N-loop | TYR 125 | Hypothetical protein GAMMAHV.M3 (B) | Hydrophobic |
| Arg 18 | 74 | N-loop | TYR 125 | Hypothetical protein GAMMAHV.M3 (B) | HBDonor |
| Arg 18 | 74 | N-loop | TYR 125 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Leu 19 | 75 | N-loop | LEU 82 | Hypothetical protein GAMMAHV.M3 (B) | Hydrophobic |
| Pro 20 | 76 | N-loop | LEU 82 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Pro 20 | 76 | N-loop | LEU 174 | Hypothetical protein GAMMAHV.M3 (B) | Hydrophobic |
| Pro 20 | 76 | N-loop | LEU 174 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Arg 23 | 82 | N-loop | GLU 80 | Hypothetical protein GAMMAHV.M3 (B) | HBDonor |
| Arg 23 | 82 | N-loop | GLU 80 | Hypothetical protein GAMMAHV.M3 (B) | Cationic |
| Arg 23 | 82 | N-loop | GLU 80 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Ile 38 | 102 | B2 | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Ile 38 | 102 | B2 | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Arg 43 | 112 | 40s-loop | GLU 81 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Arg 43 | 112 | 40s-loop | GLU 80 | Hypothetical protein GAMMAHV.M3 (B) | VdWContact |
| Leu 45 | 114 | 40s-loop | THR 226 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Leu 45 | 114 | 40s-loop | LEU 82 | Hypothetical protein GAMMAHV.M3 (B) | Hydrophobic |
| Lys 46 | 115 | B3 | SER 271 | Hypothetical protein GAMMAHV.M3 (A) | HBAcceptor |
| Lys 46 | 115 | B3 | SER 271 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Lys 46 | 115 | B3 | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | Hydrophobic |
| Lys 46 | 115 | B3 | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Cys 48 | 117 | B3 | VAL 270 | Hypothetical protein GAMMAHV.M3 (A) | HBDonor |
| Cys 48 | 117 | B3 | VAL 270 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
| Cys 48 | 117 | B3 | PRO 272 | Hypothetical protein GAMMAHV.M3 (A) | VdWContact |
Interaction pattern search
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