Interactions for 2NZ1 (chain D)


Structure details


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Chemokine diagram


T S S K C P K E A 30s-loop I V A K 40s-loop D P K Q 50s-loopN-term M K V S A A L L C L L L I A A T F I P Q G L A Q P D A I N A P V T C C Y N F T N R K I S V Q R N-termC-term T Q T P K T C-term I R R Y S A L V I F K T A C I E K W V Q D S M D H L D K Q
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Interactions found in structure


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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Val 9 61 N-term ALA 275 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Val 9 61 N-term ALA 275 Hypothetical protein GAMMAHV.M3 (A) HBAcceptor
Val 9 61 N-term ALA 275 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Thr 10 62 N-term LEU 273 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Cys 11 63 CX LEU 273 Hypothetical protein GAMMAHV.M3 (A) HBAcceptor
Cys 11 63 CX LEU 273 Hypothetical protein GAMMAHV.M3 (A) HBDonor
Cys 11 63 CX LEU 273 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Cys 11 63 CX PRO 272 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Tyr 13 68 N-loop LEU 273 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Tyr 13 68 N-loop PRO 356 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Tyr 13 68 N-loop PRO 356 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Tyr 13 68 N-loop ALA 275 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Tyr 13 68 N-loop TYR 266 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Tyr 13 68 N-loop TYR 266 Hypothetical protein GAMMAHV.M3 (A) PiStacking
Asn 14 69 N-loop SER 269 Hypothetical protein GAMMAHV.M3 (A) HBDonor
Asn 14 69 N-loop SER 269 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Asn 14 69 N-loop TYR 266 Hypothetical protein GAMMAHV.M3 (A) HBDonor
Asn 14 69 N-loop TYR 266 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Asn 14 69 N-loop VAL 270 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Asn 17 72 N-loop TYR 127 Hypothetical protein GAMMAHV.M3 (B) Hydrophobic
Arg 18 73 N-loop GLU 129 Hypothetical protein GAMMAHV.M3 (B) Cationic
Arg 18 73 N-loop GLU 129 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Arg 18 73 N-loop TYR 127 Hypothetical protein GAMMAHV.M3 (B) Hydrophobic
Lys 19 74 N-loop TYR 125 Hypothetical protein GAMMAHV.M3 (B) Hydrophobic
Lys 19 74 N-loop TYR 125 Hypothetical protein GAMMAHV.M3 (B) HBDonor
Lys 19 74 N-loop TYR 125 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Ile 20 75 N-loop LEU 82 Hypothetical protein GAMMAHV.M3 (B) Hydrophobic
Ile 20 75 N-loop LEU 82 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Ser 21 76 N-loop LEU 82 Hypothetical protein GAMMAHV.M3 (B) HBDonor
Ser 21 76 N-loop LEU 82 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Arg 24 82 N-loop GLU 81 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Arg 24 82 N-loop GLU 80 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Lys 35 94 30s-loop ALA 275 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Lys 38 97 30s-loop THR 357 Hypothetical protein GAMMAHV.M3 (A) HBDonor
Lys 38 97 30s-loop THR 357 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Ile 42 102 B2 PRO 272 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Thr 45 105 B2 LEU 82 Hypothetical protein GAMMAHV.M3 (B) Hydrophobic
Lys 49 114 40s-loop GLU 81 Hypothetical protein GAMMAHV.M3 (B) HBDonor
Lys 49 114 40s-loop GLU 81 Hypothetical protein GAMMAHV.M3 (B) Cationic
Lys 49 114 40s-loop GLU 81 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Glu 50 115 B3 PRO 272 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Glu 50 115 B3 SER 271 Hypothetical protein GAMMAHV.M3 (A) HBAcceptor
Glu 50 115 B3 SER 271 Hypothetical protein GAMMAHV.M3 (A) VdWContact
Ile 51 116 B3 VAL 270 Hypothetical protein GAMMAHV.M3 (A) Hydrophobic
Ile 51 116 B3 LEU 82 Hypothetical protein GAMMAHV.M3 (B) Hydrophobic
Ile 51 116 B3 LEU 82 Hypothetical protein GAMMAHV.M3 (B) VdWContact
Cys 52 117 B3 VAL 270 Hypothetical protein GAMMAHV.M3 (A) HBDonor
Cys 52 117 B3 VAL 270 Hypothetical protein GAMMAHV.M3 (A) VdWContact

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