Interactions for 2VXW (chain B)
Structure details
- PDB ID: 2VXW open_in_new
- Protein: CCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13501 open_in_new
- Method: X-ray
- Resolution: 1.7 Å
- Date: July 29, 2008
- Reference: 10.1002/PROT.22542 open_in_new
- State: oligomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Ala 0 | 53 | N-term | CYS 10 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ala 0 | 53 | N-term | THR 30 | C-C MOTIF CHEMOKINE 5 (D) | Hydrophobic |
| Ala 0 | 53 | N-term | VAL 40 | C-C MOTIF CHEMOKINE 5 (D) | Hydrophobic |
| Ala 0 | 53 | N-term | PHE 28 | C-C MOTIF CHEMOKINE 5 (D) | Hydrophobic |
| Ala 0 | 53 | N-term | CYS 11 | C-C MOTIF CHEMOKINE 5 (D) | Hydrophobic |
| Ala 0 | 53 | N-term | GLN 48 | C-C MOTIF CHEMOKINE 5 (D) | Hydrophobic |
| Ala 0 | 53 | N-term | GLN 48 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ala 0 | 53 | N-term | CYS 50 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ala 0 | 53 | N-term | ALA 9 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ser 1 | 54 | N-term | VAL 49 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ser 1 | 54 | N-term | CYS 50 | C-C MOTIF CHEMOKINE 5 (D) | HBAcceptor |
| Ser 1 | 54 | N-term | CYS 50 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ser 1 | 54 | N-term | GLN 48 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Pro 2 | 55 | N-term | ALA 13 | C-C MOTIF CHEMOKINE 5 (A) | Hydrophobic |
| Pro 2 | 55 | N-term | ALA 13 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Ser 5 | 58 | N-term | ALA 13 | C-C MOTIF CHEMOKINE 5 (D) | VdWContact |
| Ser 5 | 58 | N-term | CYS 50 | C-C MOTIF CHEMOKINE 5 (A) | HBAcceptor |
| Ser 5 | 58 | N-term | CYS 50 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Asp 6 | 59 | N-term | GLN 48 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Thr 7 | 60 | N-term | GLN 48 | C-C MOTIF CHEMOKINE 5 (A) | HBDonor |
| Thr 7 | 60 | N-term | GLN 48 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Thr 8 | 61 | N-term | CYS 10 | C-C MOTIF CHEMOKINE 5 (A) | HBAcceptor |
| Thr 8 | 61 | N-term | CYS 10 | C-C MOTIF CHEMOKINE 5 (A) | HBDonor |
| Thr 8 | 61 | N-term | CYS 10 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Cys 10 | 63 | CX | SER 8 | C-C MOTIF CHEMOKINE 5 (A) | HBAcceptor |
| Cys 10 | 63 | CX | SER 8 | C-C MOTIF CHEMOKINE 5 (A) | HBDonor |
| Cys 10 | 63 | CX | SER 8 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Cys 10 | 63 | CX | CYS 10 | C-C MOTIF CHEMOKINE 5 (A) | Hydrophobic |
| Phe 12 | 68 | N-loop | SER 8 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Phe 12 | 68 | N-loop | LYS 33 | C-C MOTIF CHEMOKINE 5 (A) | Hydrophobic |
| Phe 12 | 68 | N-loop | ALA 16 | C-C MOTIF CHEMOKINE 5 (C) | HBAcceptor |
| Phe 12 | 68 | N-loop | ALA 16 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Ala 13 | 69 | N-loop | ALA 13 | C-C MOTIF CHEMOKINE 5 (C) | Hydrophobic |
| Ala 13 | 69 | N-loop | PRO 2 | C-C MOTIF CHEMOKINE 5 (A) | Hydrophobic |
| Ala 13 | 69 | N-loop | TYR 14 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Tyr 14 | 70 | N-loop | ALA 16 | C-C MOTIF CHEMOKINE 5 (C) | Hydrophobic |
| Tyr 14 | 70 | N-loop | TYR 14 | C-C MOTIF CHEMOKINE 5 (C) | HBAcceptor |
| Tyr 14 | 70 | N-loop | TYR 14 | C-C MOTIF CHEMOKINE 5 (C) | HBDonor |
| Tyr 14 | 70 | N-loop | TYR 14 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Ala 16 | 72 | N-loop | PHE 12 | C-C MOTIF CHEMOKINE 5 (C) | HBDonor |
| Ala 16 | 72 | N-loop | PHE 12 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Ala 16 | 72 | N-loop | ASN 36 | C-C MOTIF CHEMOKINE 5 (C) | Hydrophobic |
| Ala 16 | 72 | N-loop | TYR 14 | C-C MOTIF CHEMOKINE 5 (C) | Hydrophobic |
| Arg 17 | 73 | N-loop | SER 35 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Arg 17 | 73 | N-loop | ASN 36 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Lys 33 | 94 | 30s-loop | PHE 12 | C-C MOTIF CHEMOKINE 5 (A) | Hydrophobic |
| Ser 35 | 96 | 30s-loop | ARG 17 | C-C MOTIF CHEMOKINE 5 (C) | HBAcceptor |
| Ser 35 | 96 | 30s-loop | ARG 17 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Asn 36 | 97 | 30s-loop | ALA 16 | C-C MOTIF CHEMOKINE 5 (C) | Hydrophobic |
| Asn 36 | 97 | 30s-loop | ARG 17 | C-C MOTIF CHEMOKINE 5 (C) | VdWContact |
| Gln 48 | 115 | B3 | SER 7 | C-C MOTIF CHEMOKINE 5 (A) | HBAcceptor |
| Gln 48 | 115 | B3 | SER 7 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Gln 48 | 115 | B3 | GLN 6 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Cys 50 | 117 | B3 | SER 5 | C-C MOTIF CHEMOKINE 5 (A) | HBDonor |
| Cys 50 | 117 | B3 | SER 5 | C-C MOTIF CHEMOKINE 5 (A) | VdWContact |
| Glu 54 | 121 | 50s-loop | LYS 55 | C-C MOTIF CHEMOKINE 5 (C) | Anionic |
| Lys 55 | 122 | 50s-loop | GLU 54 | C-C MOTIF CHEMOKINE 5 (C) | Cationic |
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