Interactions for 3HP3 (chain H)


Structure details

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Chemokine diagram

N T P N C A L Q 30s-loop K N N N R 40s-loop D P K L 50s-loopN-term M N A K V V V V L V L V L T A L C L S D G K P V S L S Y R C P C R F F E S H V A R A N N-termC-term R F K M C-term L I K L H K V I V A R L I C V Q K W I Q E Y L E K A L N K
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Ser 4 58 N-term GLN 48 CXCL12 protein (C) HBDonor
Ser 4 58 N-term GLN 48 CXCL12 protein (C) VdWContact
Leu 5 59 N-term ARG 12 CXCL12 protein (C) HBAcceptor
Leu 5 59 N-term ARG 12 CXCL12 protein (C) VdWContact
Ser 6 60 N-term CYS 50 CXCL12 protein (C) HBAcceptor
Ser 6 60 N-term CYS 50 CXCL12 protein (C) VdWContact
Ser 6 60 N-term CYS 11 CXCL12 protein (C) VdWContact
Ser 6 60 N-term GLU 15 CXCL12 protein (C) HBDonor
Ser 6 60 N-term GLU 15 CXCL12 protein (C) VdWContact
Ser 6 60 N-term ARG 12 CXCL12 protein (C) HBAcceptor
Ser 6 60 N-term ARG 12 CXCL12 protein (C) VdWContact
Ser 6 60 N-term PHE 13 CXCL12 protein (C) VdWContact
Tyr 7 61 N-term LEU 29 CXCL12 protein (C) Hydrophobic
Tyr 7 61 N-term GLN 48 CXCL12 protein (C) Hydrophobic
Tyr 7 61 N-term GLN 48 CXCL12 protein (C) VdWContact
Tyr 7 61 N-term VAL 39 CXCL12 protein (C) Hydrophobic
Tyr 7 61 N-term PRO 10 CXCL12 protein (C) Hydrophobic
Tyr 7 61 N-term PRO 10 CXCL12 protein (C) VdWContact
Arg 8 62 N-term ARG 8 CXCL12 protein (C) VdWContact
Arg 8 62 N-term CYS 9 CXCL12 protein (C) HBDonor
Arg 8 62 N-term CYS 9 CXCL12 protein (C) VdWContact
Arg 8 62 N-term PRO 10 CXCL12 protein (C) HBDonor
Arg 8 62 N-term PRO 10 CXCL12 protein (C) VdWContact
Cys 9 63 CX ARG 8 CXCL12 protein (C) HBAcceptor
Cys 9 63 CX ARG 8 CXCL12 protein (C) VdWContact
Pro 10 66 CX ARG 8 CXCL12 protein (C) HBAcceptor
Pro 10 66 CX ARG 8 CXCL12 protein (C) VdWContact
Pro 10 66 CX TYR 7 CXCL12 protein (C) Hydrophobic
Pro 10 66 CX TYR 7 CXCL12 protein (C) VdWContact
Pro 10 66 CX PRO 10 CXCL12 protein (C) Hydrophobic
Arg 12 68 N-loop LEU 5 CXCL12 protein (C) HBDonor
Arg 12 68 N-loop LEU 5 CXCL12 protein (C) VdWContact
Arg 12 68 N-loop SER 6 CXCL12 protein (C) HBDonor
Arg 12 68 N-loop SER 6 CXCL12 protein (C) VdWContact
Phe 13 69 N-loop SER 6 CXCL12 protein (C) VdWContact
Glu 15 71 N-loop SER 6 CXCL12 protein (C) HBAcceptor
Glu 15 71 N-loop SER 6 CXCL12 protein (C) VdWContact
Lys 27 87 B1 ASN 67 CXCL12 protein (D) Hydrophobic
Lys 27 87 B1 ASN 67 CXCL12 protein (D) VdWContact
Ile 28 88 B1 LEU 66 CXCL12 protein (D) Hydrophobic
Ile 28 88 B1 ASN 67 CXCL12 protein (D) HBDonor
Ile 28 88 B1 ASN 67 CXCL12 protein (D) VdWContact
Ile 28 88 B1 GLU 63 CXCL12 protein (D) Hydrophobic
Ile 28 88 B1 LEU 62 CXCL12 protein (D) Hydrophobic
Leu 29 89 B1 TYR 7 CXCL12 protein (C) Hydrophobic
Leu 29 89 B1 TYR 7 CXCL12 protein (C) VdWContact
Leu 29 89 B1 THR 31 CXCL12 protein (C) Hydrophobic
Leu 29 89 B1 THR 31 CXCL12 protein (C) VdWContact
Asn 30 90 30s-loop GLN 59 CXCL12 protein (D) Hydrophobic
Asn 30 90 30s-loop GLU 63 CXCL12 protein (D) Hydrophobic
Asn 30 90 30s-loop GLU 63 CXCL12 protein (D) HBDonor
Asn 30 90 30s-loop GLU 63 CXCL12 protein (D) VdWContact
Thr 31 91 30s-loop LEU 29 CXCL12 protein (C) Hydrophobic
Thr 31 91 30s-loop THR 31 CXCL12 protein (C) Hydrophobic
Leu 36 99 30s-loop LEU 36 CXCL12 protein (D) Hydrophobic
Leu 36 99 30s-loop LEU 62 CXCL12 protein (D) Hydrophobic
Val 39 102 B2 TYR 7 CXCL12 protein (C) Hydrophobic
Arg 41 104 B2 ASN 33 CXCL12 protein (C) HBDonor
Arg 41 104 B2 ASN 33 CXCL12 protein (C) VdWContact
Arg 47 114 40s-loop LEU 5 CXCL12 protein (C) VdWContact
Gln 48 115 B3 ASN 33 CXCL12 protein (C) VdWContact
Gln 48 115 B3 TYR 7 CXCL12 protein (C) Hydrophobic
Gln 48 115 B3 PRO 32 CXCL12 protein (C) Hydrophobic
Cys 50 117 B3 SER 6 CXCL12 protein (C) HBDonor
Cys 50 117 B3 SER 6 CXCL12 protein (C) VdWContact
Pro 53 120 50s-loop LEU 36 CXCL12 protein (D) Hydrophobic
Lys 54 121 50s-loop ASN 30 CXCL12 protein (D) HBAcceptor
Lys 54 121 50s-loop ASN 30 CXCL12 protein (D) VdWContact
Gln 59 126 Helix ASN 30 CXCL12 protein (D) Hydrophobic
Gln 59 126 Helix ASN 30 CXCL12 protein (D) HBAcceptor
Gln 59 126 Helix ASN 30 CXCL12 protein (D) VdWContact
Gln 59 126 Helix ILE 28 CXCL12 protein (D) Hydrophobic
Tyr 61 128 Helix LEU 66 CXCL12 protein (D) Hydrophobic
Tyr 61 128 Helix LEU 66 CXCL12 protein (D) VdWContact
Leu 62 129 Helix LEU 66 CXCL12 protein (D) Hydrophobic
Leu 62 129 Helix LEU 36 CXCL12 protein (D) Hydrophobic
Leu 62 129 Helix ILE 28 CXCL12 protein (D) Hydrophobic
Leu 62 129 Helix ILE 28 CXCL12 protein (D) VdWContact
Leu 62 129 Helix LEU 62 CXCL12 protein (D) Hydrophobic
Glu 63 130 Helix LYS 27 CXCL12 protein (D) Anionic
Glu 63 130 Helix ILE 28 CXCL12 protein (D) Hydrophobic
Lys 64 131 Helix LEU 66 CXCL12 protein (D) Hydrophobic
Ala 65 132 Helix LEU 66 CXCL12 protein (D) Hydrophobic
Ala 65 132 Helix LEU 62 CXCL12 protein (D) Hydrophobic
Ala 65 132 Helix ALA 65 CXCL12 protein (D) Hydrophobic
Leu 66 133 Helix LEU 26 CXCL12 protein (D) Hydrophobic
Leu 66 133 Helix LEU 26 CXCL12 protein (D) VdWContact
Leu 66 133 Helix ILE 28 CXCL12 protein (D) Hydrophobic
Leu 66 133 Helix ILE 28 CXCL12 protein (D) VdWContact
Leu 66 133 Helix TYR 61 CXCL12 protein (D) Hydrophobic
Leu 66 133 Helix TYR 61 CXCL12 protein (D) VdWContact
Leu 66 133 Helix LEU 62 CXCL12 protein (D) Hydrophobic
Asn 67 134 Helix LYS 56 CXCL12 protein (J) VdWContact

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