Interactions for 3HP3 (chain I)
Structure details
- PDB ID: 3HP3 open_in_new
- Protein: CXCL12_HUMAN
- Organism: Homo sapiens
- UniProt ID: P48061 open_in_new
- Method: X-ray
- Resolution: 2.2 Å
- Date: Jan. 26, 2010
- Reference: 10.1002/PROT.22666 open_in_new
- State: oligomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Leu 26 | 86 | B1 | ASN 67 | CXCL12 protein (G) | HBAcceptor |
| Leu 26 | 86 | B1 | ASN 67 | CXCL12 protein (G) | HBDonor |
| Leu 26 | 86 | B1 | ASN 67 | CXCL12 protein (G) | VdWContact |
| Ile 28 | 88 | B1 | ILE 28 | CXCL12 protein (G) | Hydrophobic |
| Ile 28 | 88 | B1 | LEU 62 | CXCL12 protein (G) | Hydrophobic |
| Ile 28 | 88 | B1 | LEU 62 | CXCL12 protein (G) | VdWContact |
| Ile 28 | 88 | B1 | LEU 66 | CXCL12 protein (G) | Hydrophobic |
| Ile 28 | 88 | B1 | LEU 66 | CXCL12 protein (G) | VdWContact |
| Asn 30 | 90 | 30s-loop | GLN 59 | CXCL12 protein (G) | HBAcceptor |
| Asn 30 | 90 | 30s-loop | GLN 59 | CXCL12 protein (G) | VdWContact |
| Asn 30 | 90 | 30s-loop | PRO 53 | CXCL12 protein (G) | HBDonor |
| Asn 30 | 90 | 30s-loop | PRO 53 | CXCL12 protein (G) | VdWContact |
| Leu 36 | 99 | 30s-loop | LEU 36 | CXCL12 protein (G) | Hydrophobic |
| Leu 36 | 99 | 30s-loop | PRO 53 | CXCL12 protein (G) | Hydrophobic |
| Leu 36 | 99 | 30s-loop | PRO 53 | CXCL12 protein (G) | VdWContact |
| Leu 36 | 99 | 30s-loop | ILE 38 | CXCL12 protein (G) | Hydrophobic |
| Ile 38 | 101 | B2 | LEU 36 | CXCL12 protein (G) | Hydrophobic |
| Ile 38 | 101 | B2 | LEU 36 | CXCL12 protein (G) | VdWContact |
| Pro 53 | 120 | 50s-loop | ASN 30 | CXCL12 protein (G) | HBAcceptor |
| Pro 53 | 120 | 50s-loop | ASN 30 | CXCL12 protein (G) | VdWContact |
| Pro 53 | 120 | 50s-loop | LEU 36 | CXCL12 protein (G) | Hydrophobic |
| Lys 54 | 121 | 50s-loop | THR 31 | CXCL12 protein (G) | HBDonor |
| Lys 54 | 121 | 50s-loop | THR 31 | CXCL12 protein (G) | VdWContact |
| Lys 54 | 121 | 50s-loop | ASN 30 | CXCL12 protein (G) | HBDonor |
| Lys 54 | 121 | 50s-loop | ASN 30 | CXCL12 protein (G) | VdWContact |
| Gln 59 | 126 | Helix | ASN 30 | CXCL12 protein (G) | HBDonor |
| Gln 59 | 126 | Helix | ASN 30 | CXCL12 protein (G) | VdWContact |
| Tyr 61 | 128 | Helix | LEU 66 | CXCL12 protein (G) | Hydrophobic |
| Tyr 61 | 128 | Helix | LEU 66 | CXCL12 protein (G) | HBDonor |
| Tyr 61 | 128 | Helix | LEU 66 | CXCL12 protein (G) | VdWContact |
| Leu 62 | 129 | Helix | ILE 28 | CXCL12 protein (G) | Hydrophobic |
| Leu 62 | 129 | Helix | LEU 66 | CXCL12 protein (G) | Hydrophobic |
| Ala 65 | 132 | Helix | LEU 66 | CXCL12 protein (G) | Hydrophobic |
| Leu 66 | 133 | Helix | LEU 26 | CXCL12 protein (G) | Hydrophobic |
| Leu 66 | 133 | Helix | LEU 62 | CXCL12 protein (G) | Hydrophobic |
| Leu 66 | 133 | Helix | LEU 62 | CXCL12 protein (G) | VdWContact |
| Leu 66 | 133 | Helix | ILE 28 | CXCL12 protein (G) | Hydrophobic |
| Leu 66 | 133 | Helix | ILE 28 | CXCL12 protein (G) | VdWContact |
| Leu 66 | 133 | Helix | TYR 61 | CXCL12 protein (G) | Hydrophobic |
| Leu 66 | 133 | Helix | LEU 66 | CXCL12 protein (G) | Hydrophobic |
| Leu 66 | 133 | Helix | ALA 65 | CXCL12 protein (G) | Hydrophobic |
| Asn 67 | 134 | Helix | HIS 25 | CXCL12 protein (G) | VdWContact |
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