Interactions for 5COR (chain G)
Structure details
- PDB ID: 5COR open_in_new
- Protein: CCL3_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10147 open_in_new
- Method: X-ray
- Resolution: 2.55 Å
- Date: April 13, 2016
- Reference: 10.1073/PNAS.1523981113 open_in_new
- State: oligomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Ala 1 | 53 | N-term | SER 33 | C-C motif chemokine 3 (F) | VdWContact |
| Ser 2 | 54 | N-term | GLN 34 | C-C motif chemokine 3 (F) | VdWContact |
| Ser 2 | 54 | N-term | SER 33 | C-C motif chemokine 3 (F) | HBAcceptor |
| Ser 2 | 54 | N-term | SER 33 | C-C motif chemokine 3 (F) | HBDonor |
| Ser 2 | 54 | N-term | SER 33 | C-C motif chemokine 3 (F) | VdWContact |
| Leu 3 | 55 | N-term | ALA 4 | C-C motif chemokine 3 (F) | VdWContact |
| Leu 3 | 55 | N-term | GLN 34 | C-C motif chemokine 3 (F) | HBAcceptor |
| Leu 3 | 55 | N-term | GLN 34 | C-C motif chemokine 3 (F) | VdWContact |
| Leu 3 | 55 | N-term | LEU 3 | C-C motif chemokine 3 (F) | Hydrophobic |
| Ala 4 | 56 | N-term | SER 14 | C-C motif chemokine 3 (H) | HBAcceptor |
| Ala 4 | 56 | N-term | SER 14 | C-C motif chemokine 3 (H) | VdWContact |
| Ala 4 | 56 | N-term | LEU 3 | C-C motif chemokine 3 (F) | VdWContact |
| Ala 5 | 57 | N-term | SER 32 | C-C motif chemokine 3 (F) | VdWContact |
| Ala 5 | 57 | N-term | SER 14 | C-C motif chemokine 3 (H) | VdWContact |
| Ala 5 | 57 | N-term | GLN 34 | C-C motif chemokine 3 (F) | VdWContact |
| Asp 6 | 58 | N-term | CYS 51 | C-C motif chemokine 3 (H) | HBAcceptor |
| Asp 6 | 58 | N-term | CYS 51 | C-C motif chemokine 3 (H) | VdWContact |
| Asp 6 | 58 | N-term | SER 14 | C-C motif chemokine 3 (H) | VdWContact |
| Pro 8 | 60 | N-term | ILE 41 | C-C motif chemokine 3 (H) | Hydrophobic |
| Pro 8 | 60 | N-term | ILE 41 | C-C motif chemokine 3 (H) | VdWContact |
| Pro 8 | 60 | N-term | GLN 49 | C-C motif chemokine 3 (H) | Hydrophobic |
| Pro 8 | 60 | N-term | CYS 11 | C-C motif chemokine 3 (H) | VdWContact |
| Pro 8 | 60 | N-term | ALA 10 | C-C motif chemokine 3 (H) | Hydrophobic |
| Thr 9 | 61 | N-term | CYS 11 | C-C motif chemokine 3 (H) | HBAcceptor |
| Thr 9 | 61 | N-term | CYS 11 | C-C motif chemokine 3 (H) | HBDonor |
| Thr 9 | 61 | N-term | CYS 11 | C-C motif chemokine 3 (H) | VdWContact |
| Thr 9 | 61 | N-term | ALA 10 | C-C motif chemokine 3 (H) | VdWContact |
| Ala 10 | 62 | N-term | PRO 8 | C-C motif chemokine 3 (H) | Hydrophobic |
| Ala 10 | 62 | N-term | PRO 8 | C-C motif chemokine 3 (H) | VdWContact |
| Cys 11 | 63 | CX | THR 9 | C-C motif chemokine 3 (H) | HBAcceptor |
| Cys 11 | 63 | CX | THR 9 | C-C motif chemokine 3 (H) | HBDonor |
| Cys 11 | 63 | CX | THR 9 | C-C motif chemokine 3 (H) | VdWContact |
| Phe 13 | 68 | N-loop | THR 9 | C-C motif chemokine 3 (H) | Hydrophobic |
| Phe 13 | 68 | N-loop | THR 9 | C-C motif chemokine 3 (H) | VdWContact |
| Phe 13 | 68 | N-loop | GLN 34 | C-C motif chemokine 3 (H) | Hydrophobic |
| Phe 13 | 68 | N-loop | GLN 34 | C-C motif chemokine 3 (H) | VdWContact |
| Ser 14 | 69 | N-loop | ASP 6 | C-C motif chemokine 3 (H) | HBDonor |
| Ser 14 | 69 | N-loop | ASP 6 | C-C motif chemokine 3 (H) | VdWContact |
| Tyr 15 | 70 | N-loop | SER 33 | C-C motif chemokine 3 (I) | HBAcceptor |
| Tyr 15 | 70 | N-loop | SER 33 | C-C motif chemokine 3 (I) | VdWContact |
| Ser 17 | 72 | N-loop | SER 33 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 18 | 73 | N-loop | GLU 30 | C-C motif chemokine 3 (I) | Cationic |
| Arg 18 | 73 | N-loop | GLU 30 | C-C motif chemokine 3 (I) | VdWContact |
| Phe 24 | 82 | N-loop | SER 64 | C-C motif chemokine 3 (I) | VdWContact |
| Phe 24 | 82 | N-loop | VAL 63 | C-C motif chemokine 3 (I) | Hydrophobic |
| Phe 24 | 82 | N-loop | LEU 68 | C-C motif chemokine 3 (I) | Hydrophobic |
| Phe 24 | 82 | N-loop | GLU 67 | C-C motif chemokine 3 (I) | Hydrophobic |
| Asp 27 | 85 | B1 | ARG 46 | C-C motif chemokine 3 (E) | Anionic |
| Asp 27 | 85 | B1 | ARG 48 | C-C motif chemokine 3 (E) | Anionic |
| Asp 27 | 85 | B1 | ARG 48 | C-C motif chemokine 3 (E) | VdWContact |
| Tyr 28 | 86 | B1 | ARG 46 | C-C motif chemokine 3 (E) | Hydrophobic |
| Tyr 28 | 86 | B1 | ARG 48 | C-C motif chemokine 3 (E) | Hydrophobic |
| Tyr 28 | 86 | B1 | ARG 48 | C-C motif chemokine 3 (E) | HBAcceptor |
| Tyr 28 | 86 | B1 | ARG 48 | C-C motif chemokine 3 (E) | VdWContact |
| Ser 33 | 91 | 30s-loop | SER 2 | C-C motif chemokine 3 (F) | HBAcceptor |
| Ser 33 | 91 | 30s-loop | SER 2 | C-C motif chemokine 3 (F) | HBDonor |
| Ser 33 | 91 | 30s-loop | SER 2 | C-C motif chemokine 3 (F) | VdWContact |
| Ser 33 | 91 | 30s-loop | ALA 1 | C-C motif chemokine 3 (F) | VdWContact |
| Gln 34 | 94 | 30s-loop | SER 2 | C-C motif chemokine 3 (F) | VdWContact |
| Gln 34 | 94 | 30s-loop | ALA 5 | C-C motif chemokine 3 (F) | VdWContact |
| Gln 34 | 94 | 30s-loop | LEU 3 | C-C motif chemokine 3 (F) | HBDonor |
| Gln 34 | 94 | 30s-loop | LEU 3 | C-C motif chemokine 3 (F) | VdWContact |
| Gln 34 | 94 | 30s-loop | ALA 4 | C-C motif chemokine 3 (F) | VdWContact |
| Gln 34 | 94 | 30s-loop | PHE 13 | C-C motif chemokine 3 (H) | Hydrophobic |
| Ile 41 | 102 | B2 | PRO 8 | C-C motif chemokine 3 (H) | Hydrophobic |
| Ile 41 | 102 | B2 | PRO 8 | C-C motif chemokine 3 (H) | VdWContact |
| Thr 44 | 105 | B2 | GLU 67 | C-C motif chemokine 3 (I) | HBDonor |
| Arg 46 | 112 | 40s-loop | LEU 66 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 46 | 112 | 40s-loop | ALA 70 | C-C motif chemokine 3 (I) | Hydrophobic |
| Arg 46 | 112 | 40s-loop | ALA 70 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 46 | 112 | 40s-loop | ASP 27 | C-C motif chemokine 3 (I) | HBDonor |
| Arg 46 | 112 | 40s-loop | ASP 27 | C-C motif chemokine 3 (I) | Cationic |
| Arg 46 | 112 | 40s-loop | ASP 27 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 46 | 112 | 40s-loop | GLU 67 | C-C motif chemokine 3 (I) | HBDonor |
| Arg 46 | 112 | 40s-loop | GLU 67 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 48 | 114 | 40s-loop | TYR 28 | C-C motif chemokine 3 (I) | HBDonor |
| Arg 48 | 114 | 40s-loop | TYR 28 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 48 | 114 | 40s-loop | ASP 27 | C-C motif chemokine 3 (I) | HBDonor |
| Arg 48 | 114 | 40s-loop | ASP 27 | C-C motif chemokine 3 (I) | Cationic |
| Arg 48 | 114 | 40s-loop | ASP 27 | C-C motif chemokine 3 (I) | VdWContact |
| Arg 48 | 114 | 40s-loop | PHE 29 | C-C motif chemokine 3 (I) | CationPi |
| Gln 49 | 115 | B3 | PRO 8 | C-C motif chemokine 3 (H) | Hydrophobic |
| Gln 49 | 115 | B3 | THR 7 | C-C motif chemokine 3 (H) | VdWContact |
| Cys 51 | 117 | B3 | ASP 6 | C-C motif chemokine 3 (H) | HBDonor |
| Cys 51 | 117 | B3 | ASP 6 | C-C motif chemokine 3 (H) | VdWContact |
| Val 63 | 129 | Helix | PHE 24 | C-C motif chemokine 3 (E) | Hydrophobic |
| Ser 64 | 130 | Helix | PHE 24 | C-C motif chemokine 3 (E) | VdWContact |
| Leu 66 | 132 | Helix | ARG 46 | C-C motif chemokine 3 (E) | HBAcceptor |
| Leu 66 | 132 | Helix | ARG 46 | C-C motif chemokine 3 (E) | VdWContact |
| Glu 67 | 133 | Helix | ARG 46 | C-C motif chemokine 3 (E) | Hydrophobic |
| Glu 67 | 133 | Helix | ARG 46 | C-C motif chemokine 3 (E) | HBAcceptor |
| Glu 67 | 133 | Helix | ARG 46 | C-C motif chemokine 3 (E) | VdWContact |
| Glu 67 | 133 | Helix | THR 44 | C-C motif chemokine 3 (E) | HBAcceptor |
| Glu 67 | 133 | Helix | THR 44 | C-C motif chemokine 3 (E) | VdWContact |
| Glu 67 | 133 | Helix | LYS 45 | C-C motif chemokine 3 (E) | VdWContact |
| Glu 67 | 133 | Helix | PHE 24 | C-C motif chemokine 3 (E) | Hydrophobic |
| Leu 68 | 134 | Helix | ASN 23 | C-C motif chemokine 3 (E) | Hydrophobic |
| Leu 68 | 134 | Helix | PHE 24 | C-C motif chemokine 3 (E) | Hydrophobic |
| Ala 70 | 136 | C-term | ARG 46 | C-C motif chemokine 3 (E) | Hydrophobic |
| Ala 70 | 136 | C-term | ARG 46 | C-C motif chemokine 3 (E) | VdWContact |
| Ala 70 | 136 | C-term | LYS 45 | C-C motif chemokine 3 (E) | Hydrophobic |
| Ala 70 | 136 | C-term | LYS 45 | C-C motif chemokine 3 (E) | VdWContact |
Ligand interaction network
HEZ_A_101
HEZ_A_102
HEZ_B_101
HEZ_C_101
HEZ_E_101
HEZ_E_102
HEZ_E_103
HEZ_F_101
ACT_F_102
HEZ_H_101
HEZ_H_102
ACT_I_101
ACT_I_102
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