Interactions for 5D65 (chain A)
Structure details
- PDB ID: 5D65 open_in_new
- Protein: CCL3_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10147 open_in_new
- Method: X-ray
- Resolution: 3.1 Å
- Date: April 20, 2016
- Reference: 10.1073/PNAS.1523981113 open_in_new
- State: oligomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Ser 2 | 54 | N-term | GLN 49 | C-C motif chemokine 3 (C) | HBAcceptor |
| Ser 2 | 54 | N-term | GLN 49 | C-C motif chemokine 3 (C) | VdWContact |
| Leu 3 | 55 | N-term | ALA 10 | C-C motif chemokine 3 (B) | Hydrophobic |
| Leu 3 | 55 | N-term | PRO 8 | C-C motif chemokine 3 (C) | Hydrophobic |
| Leu 3 | 55 | N-term | PRO 8 | C-C motif chemokine 3 (C) | VdWContact |
| Leu 3 | 55 | N-term | ALA 10 | C-C motif chemokine 3 (C) | Hydrophobic |
| Ala 4 | 56 | N-term | PRO 8 | C-C motif chemokine 3 (C) | HBDonor |
| Ala 4 | 56 | N-term | PRO 8 | C-C motif chemokine 3 (C) | VdWContact |
| Ala 4 | 56 | N-term | ALA 10 | C-C motif chemokine 3 (C) | VdWContact |
| Ala 5 | 57 | N-term | PHE 29 | C-C motif chemokine 3 (C) | Hydrophobic |
| Pro 8 | 60 | N-term | LEU 3 | C-C motif chemokine 3 (C) | VdWContact |
| Thr 9 | 61 | N-term | ALA 4 | C-C motif chemokine 3 (C) | Hydrophobic |
| Thr 9 | 61 | N-term | ALA 4 | C-C motif chemokine 3 (C) | VdWContact |
| Ala 26 | 84 | B1 | ARG 46 | C-C motif chemokine 3 (B) | VdWContact |
| Asp 27 | 85 | B1 | ARG 48 | C-C motif chemokine 3 (B) | Anionic |
| Asp 27 | 85 | B1 | ARG 48 | C-C motif chemokine 3 (B) | VdWContact |
| Asp 27 | 85 | B1 | ARG 46 | C-C motif chemokine 3 (B) | HBAcceptor |
| Asp 27 | 85 | B1 | ARG 46 | C-C motif chemokine 3 (B) | Anionic |
| Asp 27 | 85 | B1 | ARG 46 | C-C motif chemokine 3 (B) | VdWContact |
| Tyr 28 | 86 | B1 | ARG 46 | C-C motif chemokine 3 (B) | Hydrophobic |
| Tyr 28 | 86 | B1 | ARG 48 | C-C motif chemokine 3 (B) | HBAcceptor |
| Tyr 28 | 86 | B1 | ARG 48 | C-C motif chemokine 3 (B) | VdWContact |
| Ser 33 | 91 | 30s-loop | TYR 15 | C-C motif chemokine 3 (B) | HBDonor |
| Ser 33 | 91 | 30s-loop | TYR 15 | C-C motif chemokine 3 (B) | VdWContact |
| Val 63 | 129 | Helix | PHE 24 | C-C motif chemokine 3 (B) | Hydrophobic |
| Ser 64 | 130 | Helix | PHE 24 | C-C motif chemokine 3 (B) | VdWContact |
| Leu 66 | 132 | Helix | ARG 46 | C-C motif chemokine 3 (B) | VdWContact |
| Glu 67 | 133 | Helix | PHE 24 | C-C motif chemokine 3 (B) | Hydrophobic |
| Glu 67 | 133 | Helix | PHE 24 | C-C motif chemokine 3 (B) | VdWContact |
| Glu 67 | 133 | Helix | THR 44 | C-C motif chemokine 3 (B) | HBAcceptor |
| Glu 67 | 133 | Helix | THR 44 | C-C motif chemokine 3 (B) | VdWContact |
| Glu 67 | 133 | Helix | ARG 46 | C-C motif chemokine 3 (B) | Hydrophobic |
| Glu 67 | 133 | Helix | ARG 46 | C-C motif chemokine 3 (B) | HBAcceptor |
| Glu 67 | 133 | Helix | ARG 46 | C-C motif chemokine 3 (B) | VdWContact |
| Glu 67 | 133 | Helix | LYS 45 | C-C motif chemokine 3 (B) | VdWContact |
| Leu 68 | 134 | Helix | PHE 24 | C-C motif chemokine 3 (B) | Hydrophobic |
| Leu 68 | 134 | Helix | ASN 23 | C-C motif chemokine 3 (B) | Hydrophobic |
Interaction pattern search
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