Interactions for 5D65 (chain E)
Structure details
- PDB ID: 5D65 open_in_new
- Protein: CCL3_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10147 open_in_new
- Method: X-ray
- Resolution: 3.1 Å
- Date: April 20, 2016
- Reference: 10.1073/PNAS.1523981113 open_in_new
- State: oligomer
Chemokine diagram
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Interactions found in structure
Download list in excel
| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Asp 6 | 58 | N-term | VAL 50 | C-C motif chemokine 3 (D) | Hydrophobic |
| Asp 6 | 58 | N-term | THR 16 | C-C motif chemokine 3 (D) | VdWContact |
| Asp 6 | 58 | N-term | SER 14 | C-C motif chemokine 3 (D) | HBAcceptor |
| Asp 6 | 58 | N-term | SER 14 | C-C motif chemokine 3 (D) | VdWContact |
| Pro 8 | 60 | N-term | GLN 49 | C-C motif chemokine 3 (D) | Hydrophobic |
| Pro 8 | 60 | N-term | ALA 10 | C-C motif chemokine 3 (D) | Hydrophobic |
| Pro 8 | 60 | N-term | ALA 10 | C-C motif chemokine 3 (D) | VdWContact |
| Pro 8 | 60 | N-term | ILE 41 | C-C motif chemokine 3 (D) | Hydrophobic |
| Pro 8 | 60 | N-term | ILE 41 | C-C motif chemokine 3 (D) | VdWContact |
| Thr 9 | 61 | N-term | PHE 13 | C-C motif chemokine 3 (D) | Hydrophobic |
| Thr 9 | 61 | N-term | PHE 13 | C-C motif chemokine 3 (D) | VdWContact |
| Thr 9 | 61 | N-term | CYS 11 | C-C motif chemokine 3 (D) | HBAcceptor |
| Thr 9 | 61 | N-term | CYS 11 | C-C motif chemokine 3 (D) | HBDonor |
| Thr 9 | 61 | N-term | CYS 11 | C-C motif chemokine 3 (D) | VdWContact |
| Ala 10 | 62 | N-term | PRO 8 | C-C motif chemokine 3 (D) | Hydrophobic |
| Cys 11 | 63 | CX | PRO 8 | C-C motif chemokine 3 (D) | VdWContact |
| Cys 11 | 63 | CX | PHE 13 | C-C motif chemokine 3 (D) | VdWContact |
| Cys 11 | 63 | CX | THR 9 | C-C motif chemokine 3 (D) | HBAcceptor |
| Cys 11 | 63 | CX | THR 9 | C-C motif chemokine 3 (D) | HBDonor |
| Cys 11 | 63 | CX | THR 9 | C-C motif chemokine 3 (D) | VdWContact |
| Phe 13 | 68 | N-loop | THR 9 | C-C motif chemokine 3 (D) | Hydrophobic |
| Phe 13 | 68 | N-loop | THR 9 | C-C motif chemokine 3 (D) | VdWContact |
| Phe 13 | 68 | N-loop | GLN 34 | C-C motif chemokine 3 (D) | Hydrophobic |
| Phe 13 | 68 | N-loop | GLN 34 | C-C motif chemokine 3 (D) | VdWContact |
| Tyr 15 | 70 | N-loop | SER 33 | C-C motif chemokine 3 (B) | HBAcceptor |
| Tyr 15 | 70 | N-loop | SER 33 | C-C motif chemokine 3 (B) | VdWContact |
| Thr 16 | 71 | N-loop | ASP 6 | C-C motif chemokine 3 (D) | VdWContact |
| Ser 17 | 72 | N-loop | SER 33 | C-C motif chemokine 3 (B) | VdWContact |
| Phe 24 | 82 | N-loop | GLU 67 | C-C motif chemokine 3 (B) | Hydrophobic |
| Phe 24 | 82 | N-loop | VAL 63 | C-C motif chemokine 3 (B) | Hydrophobic |
| Phe 24 | 82 | N-loop | SER 64 | C-C motif chemokine 3 (B) | VdWContact |
| Phe 24 | 82 | N-loop | LEU 68 | C-C motif chemokine 3 (B) | Hydrophobic |
| Gln 34 | 94 | 30s-loop | PHE 13 | C-C motif chemokine 3 (D) | Hydrophobic |
| Gln 34 | 94 | 30s-loop | PHE 13 | C-C motif chemokine 3 (D) | VdWContact |
| Ile 41 | 102 | B2 | PRO 8 | C-C motif chemokine 3 (D) | Hydrophobic |
| Ile 41 | 102 | B2 | PRO 8 | C-C motif chemokine 3 (D) | VdWContact |
| Lys 45 | 106 | 40s-loop | GLU 67 | C-C motif chemokine 3 (B) | VdWContact |
| Arg 46 | 112 | 40s-loop | GLU 67 | C-C motif chemokine 3 (B) | HBDonor |
| Arg 46 | 112 | 40s-loop | GLU 67 | C-C motif chemokine 3 (B) | VdWContact |
| Arg 46 | 112 | 40s-loop | TYR 28 | C-C motif chemokine 3 (B) | Hydrophobic |
| Arg 46 | 112 | 40s-loop | ASP 27 | C-C motif chemokine 3 (B) | Cationic |
| Arg 46 | 112 | 40s-loop | ASP 27 | C-C motif chemokine 3 (B) | VdWContact |
| Arg 46 | 112 | 40s-loop | LEU 66 | C-C motif chemokine 3 (B) | HBDonor |
| Arg 46 | 112 | 40s-loop | LEU 66 | C-C motif chemokine 3 (B) | VdWContact |
| Arg 48 | 114 | 40s-loop | TYR 28 | C-C motif chemokine 3 (B) | CationPi |
| Arg 48 | 114 | 40s-loop | TYR 28 | C-C motif chemokine 3 (B) | VdWContact |
| Arg 48 | 114 | 40s-loop | ASP 27 | C-C motif chemokine 3 (B) | HBDonor |
| Arg 48 | 114 | 40s-loop | ASP 27 | C-C motif chemokine 3 (B) | Cationic |
| Arg 48 | 114 | 40s-loop | ASP 27 | C-C motif chemokine 3 (B) | VdWContact |
| Arg 48 | 114 | 40s-loop | PHE 29 | C-C motif chemokine 3 (B) | CationPi |
| Arg 48 | 114 | 40s-loop | PHE 29 | C-C motif chemokine 3 (B) | VdWContact |
| Gln 49 | 115 | B3 | PRO 8 | C-C motif chemokine 3 (D) | Hydrophobic |
| Gln 49 | 115 | B3 | THR 7 | C-C motif chemokine 3 (D) | Hydrophobic |
| Gln 49 | 115 | B3 | THR 7 | C-C motif chemokine 3 (D) | VdWContact |
| Val 50 | 116 | B3 | ASP 6 | C-C motif chemokine 3 (D) | Hydrophobic |
| Cys 51 | 117 | B3 | ASP 6 | C-C motif chemokine 3 (D) | HBDonor |
| Cys 51 | 117 | B3 | ASP 6 | C-C motif chemokine 3 (D) | VdWContact |
Interaction pattern search
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