Interactions for 6AEZ (chain C)


Structure details

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Chemokine diagram

S G K C S N P A 30s-loop R K N R 40s-loop N P E K 50s-loopN-term M K V S A A A L A V I L I A T A L C A P A S A S P Y S S D T T P C C F A Y I A R P L P R A H N-term T Y F Y E K I V V F V T A C V Q K W V R E Y I N S L E M S
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Interactions found in structure

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Chemokine Residue Generic number Segment Partner Residue Partner Interaction Type
Tyr 4 56 N-term ILE 16 C-C motif chemokine 5 (A) Hydrophobic
Tyr 4 56 N-term ARG 48 C-C motif chemokine 5 (A) VdWContact
Tyr 4 56 N-term ALA 14 C-C motif chemokine 5 (B) Hydrophobic
Tyr 4 56 N-term PHE 13 C-C motif chemokine 5 (B) Hydrophobic
Ser 5 57 N-term ALA 14 C-C motif chemokine 5 (B) VdWContact
Ser 6 58 N-term CYS 51 C-C motif chemokine 5 (B) HBAcceptor
Ser 6 58 N-term CYS 51 C-C motif chemokine 5 (B) VdWContact
Thr 8 60 N-term PRO 10 C-C motif chemokine 5 (B) Hydrophobic
Thr 8 60 N-term VAL 41 C-C motif chemokine 5 (B) Hydrophobic
Thr 8 60 N-term GLN 49 C-C motif chemokine 5 (B) Hydrophobic
Thr 8 60 N-term GLN 49 C-C motif chemokine 5 (B) HBDonor
Thr 8 60 N-term GLN 49 C-C motif chemokine 5 (B) VdWContact
Thr 9 61 N-term PHE 13 C-C motif chemokine 5 (B) Hydrophobic
Thr 9 61 N-term PHE 13 C-C motif chemokine 5 (B) VdWContact
Thr 9 61 N-term CYS 11 C-C motif chemokine 5 (B) HBAcceptor
Thr 9 61 N-term CYS 11 C-C motif chemokine 5 (B) HBDonor
Thr 9 61 N-term CYS 11 C-C motif chemokine 5 (B) VdWContact
Pro 10 62 N-term THR 8 C-C motif chemokine 5 (B) Hydrophobic
Cys 11 63 CX THR 9 C-C motif chemokine 5 (B) HBAcceptor
Cys 11 63 CX THR 9 C-C motif chemokine 5 (B) HBDonor
Cys 11 63 CX THR 9 C-C motif chemokine 5 (B) VdWContact
Phe 13 68 N-loop LYS 34 C-C motif chemokine 5 (B) Hydrophobic
Phe 13 68 N-loop PRO 3 C-C motif chemokine 5 (B) Hydrophobic
Phe 13 68 N-loop PRO 3 C-C motif chemokine 5 (B) VdWContact
Phe 13 68 N-loop THR 9 C-C motif chemokine 5 (B) Hydrophobic
Phe 13 68 N-loop THR 9 C-C motif chemokine 5 (B) VdWContact
Ala 14 69 N-loop SER 6 C-C motif chemokine 5 (B) VdWContact
Ala 14 69 N-loop SER 5 C-C motif chemokine 5 (B) VdWContact
Ile 16 71 N-loop SER 6 C-C motif chemokine 5 (B) HBAcceptor
Ile 16 71 N-loop SER 6 C-C motif chemokine 5 (B) VdWContact
Lys 34 94 30s-loop PHE 13 C-C motif chemokine 5 (B) Hydrophobic
Val 41 102 B2 THR 8 C-C motif chemokine 5 (B) Hydrophobic
Arg 48 114 40s-loop ASP 7 C-C motif chemokine 5 (B) HBDonor
Arg 48 114 40s-loop ASP 7 C-C motif chemokine 5 (B) Cationic
Arg 48 114 40s-loop ASP 7 C-C motif chemokine 5 (B) VdWContact
Gln 49 115 B3 ASP 7 C-C motif chemokine 5 (B) VdWContact
Gln 49 115 B3 THR 8 C-C motif chemokine 5 (B) Hydrophobic
Gln 49 115 B3 THR 8 C-C motif chemokine 5 (B) HBAcceptor
Gln 49 115 B3 THR 8 C-C motif chemokine 5 (B) VdWContact
Cys 51 117 B3 SER 6 C-C motif chemokine 5 (B) HBDonor
Cys 51 117 B3 SER 6 C-C motif chemokine 5 (B) VdWContact
Lys 56 122 50s-loop UNL 1 SULFATE ION (None) HBAcceptor
Lys 56 122 50s-loop UNL 1 SULFATE ION (None) Anionic
Lys 56 122 50s-loop UNL 1 SULFATE ION (None) VdWContact
Lys 56 122 50s-loop UNL 1 SULFATE ION (None) HBAcceptor
Lys 56 122 50s-loop UNL 1 SULFATE ION (None) Anionic
Lys 56 122 50s-loop UNL 1 SULFATE ION (None) VdWContact
Lys 57 123 Helix UNL 1 SULFATE ION (None) HBAcceptor
Lys 57 123 Helix UNL 1 SULFATE ION (None) VdWContact
Lys 57 123 Helix UNL 1 SULFATE ION (None) HBAcceptor
Lys 57 123 Helix UNL 1 SULFATE ION (None) VdWContact
Arg 60 126 Helix UNL 1 SULFATE ION (None) Anionic
Arg 60 126 Helix UNL 1 SULFATE ION (None) Anionic

Ligand interaction network

SO4_A_101

SO4_A_102

SO4_B_101

SO4_B_102

SO4_B_103

SO4_C_101

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