Interactions for 6WWZ (chain C)
Structure details
- PDB ID: 6WWZ open_in_new
- Protein: CCL20_HUMAN
- Organism: Homo sapiens
- UniProt ID: P78556 open_in_new
- Method: Cryo-em
- Resolution: 3.34 Å
- Date: June 24, 2020
- Reference: 10.1038/S41467-020-16820-6 open_in_new
- State: monomer
Chemokine diagram
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Interactions found in structure
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| Chemokine Residue | Generic number | Segment | Partner Residue | Partner | Interaction Type |
|---|---|---|---|---|---|
| Ala 1 | 58 | N-term | GLU 198 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Asn 3 | 60 | N-term | ARG 42 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Asn 3 | 60 | N-term | ARG 42 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | HBAcceptor |
| Asn 3 | 60 | N-term | VAL 41 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Asn 3 | 60 | N-term | LEU 38 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Phe 4 | 61 | N-term | THR 191 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Phe 4 | 61 | N-term | VAL 196 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Phe 4 | 61 | N-term | GLN 192 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Asp 5 | 62 | N-term | LEU 35 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Asp 5 | 62 | N-term | LEU 35 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Asp 5 | 62 | N-term | CYS 36 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Asp 5 | 62 | N-term | GLN 192 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Leu 8 | 68 | N-loop | ARG 286 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Leu 8 | 68 | N-loop | CYS 288 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Tyr 10 | 70 | N-loop | MET 284 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Tyr 10 | 70 | N-loop | MET 284 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Phe 19 | 82 | N-loop | TYR 27 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Asn 29 | 92 | 30s-loop | TYR 201 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Glu 30 | 93 | 30s-loop | TYR 189 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Glu 30 | 93 | 30s-loop | TYR 189 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Glu 30 | 93 | 30s-loop | LYS 200 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Hydrophobic |
| Glu 30 | 93 | 30s-loop | LYS 200 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | HBAcceptor |
| Glu 30 | 93 | 30s-loop | LYS 200 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Anionic |
| Glu 30 | 93 | 30s-loop | LYS 200 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Cys 32 | 95 | 30s-loop | LYS 211 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Asp 33 | 96 | 30s-loop | ARG 286 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | Anionic |
| Asp 33 | 96 | 30s-loop | ARG 286 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
| Ser 46 | 115 | B3 | LEU 35 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | HBAcceptor |
| Ser 46 | 115 | B3 | LEU 35 | C-C chemokine receptor type 6,C-C chemokine receptor type 6 (R) | VdWContact |
Interaction pattern search
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