Interactions for 1A15 — Binding Partner: CXCL12


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

N T P A C A L Q 30s-loop K N N N R 40s-loop D P K L 50s-loopC-term K P V S L S Y R C P C R F F E S H V A R A N N-term L I K L H K V I V A R L I C V Q K W I Q E Y L E K A L N
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Arg 20 80 N-loop ASN 30 B VdWContact
Val 23 83 B1 ASN 30 B HBAcceptor
Val 23 83 B1 ASN 30 B VdWContact
Lys 24 84 B1 ASN 30 B HBAcceptor
Lys 24 84 B1 ASN 30 B VdWContact
His 25 85 B1 ILE 28 B VdWContact
His 25 85 B1 LEU 29 B Hydrophobic
His 25 85 B1 LEU 29 B VdWContact
His 25 85 B1 LYS 27 B Hydrophobic
Leu 26 86 B1 ILE 28 B Hydrophobic
Leu 26 86 B1 ILE 28 B HBAcceptor
Leu 26 86 B1 ILE 28 B HBDonor
Leu 26 86 B1 ILE 28 B VdWContact
Leu 26 86 B1 LYS 27 B VdWContact
Lys 27 87 B1 HIS 25 B Hydrophobic
Lys 27 87 B1 LEU 26 B VdWContact
Ile 28 88 B1 ILE 28 B Hydrophobic
Ile 28 88 B1 TYR 61 B Hydrophobic
Ile 28 88 B1 TYR 61 B HBAcceptor
Ile 28 88 B1 TYR 61 B VdWContact
Ile 28 88 B1 LEU 62 B Hydrophobic
Ile 28 88 B1 LEU 62 B VdWContact
Ile 28 88 B1 LEU 26 B Hydrophobic
Ile 28 88 B1 LEU 26 B HBAcceptor
Ile 28 88 B1 LEU 26 B HBDonor
Ile 28 88 B1 LEU 26 B VdWContact
Leu 29 89 B1 TYR 61 B VdWContact
Leu 29 89 B1 HIS 25 B Hydrophobic
Asn 30 90 30s-loop GLU 63 B VdWContact
Asn 30 90 30s-loop TYR 61 B Hydrophobic
Asn 30 90 30s-loop TYR 61 B HBDonor
Asn 30 90 30s-loop TYR 61 B VdWContact
Leu 36 99 30s-loop GLU 63 B VdWContact
Leu 36 99 30s-loop TYR 61 B VdWContact
Tyr 61 128 Helix ILE 28 B Hydrophobic
Tyr 61 128 Helix ILE 28 B HBDonor
Tyr 61 128 Helix ILE 28 B VdWContact
Tyr 61 128 Helix ASN 30 B Hydrophobic
Tyr 61 128 Helix ASN 30 B VdWContact
Leu 62 129 Helix ILE 28 B Hydrophobic
Leu 62 129 Helix ILE 28 B VdWContact
Leu 62 129 Helix LEU 62 B Hydrophobic
Ala 65 132 Helix ILE 28 B Hydrophobic
Ala 65 132 Helix GLN 37 B Hydrophobic
Ala 65 132 Helix ILE 38 B Hydrophobic
Leu 66 133 Helix PRO 53 B Hydrophobic
Leu 66 133 Helix PRO 53 B VdWContact
Leu 66 133 Helix LYS 54 B HBAcceptor
Leu 66 133 Helix LYS 54 B VdWContact
Asn 67 134 Helix PRO 53 B VdWContact
Asn 67 134 Helix LEU 62 B VdWContact

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