Interactions for 1QG7 — Binding Partner: CXCL12
Structure details
- PDB ID: 1QG7 open_in_new
- Protein: CXCL12_HUMAN
- Organism: Homo sapiens
- UniProt ID: P48061 open_in_new
- Method: X-ray
- Resolution: 2.0 Å
- Date: Feb. 28, 2001
- Reference: 10.1089/10799900050116390 open_in_new
- State: Dimer
- Chemokine Chain: B
- Partner Chain: A
Interactions for this Binding Partner
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| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Ala 65 | H.10 | Helix | LEU 36 | A | Hydrophobic |
| Ala 65 | H.10 | Helix | ILE 38 | A | Hydrophobic |
| Ala 65 | H.10 | Helix | GLN 59 | A | HBAcceptor |
| Ala 65 | H.10 | Helix | GLN 59 | A | VdWContact |
| Ala 65 | H.10 | Helix | LEU 62 | A | Hydrophobic |
| Ala 65 | H.10 | Helix | LEU 62 | A | VdWContact |
| Ala 65 | H.10 | Helix | ILE 58 | A | Hydrophobic |
| Asn 30 | b1b2.7 | 30s-loop | VAL 23 | A | HBDonor |
| Asn 30 | b1b2.7 | 30s-loop | VAL 23 | A | VdWContact |
| Asn 30 | b1b2.7 | 30s-loop | TYR 61 | A | Hydrophobic |
| Asn 30 | b1b2.7 | 30s-loop | TYR 61 | A | VdWContact |
| Asn 30 | b1b2.7 | 30s-loop | LYS 24 | A | HBDonor |
| Asn 30 | b1b2.7 | 30s-loop | LYS 24 | A | VdWContact |
| Asn 30 | b1b2.7 | 30s-loop | ARG 20 | A | HBAcceptor |
| Asn 30 | b1b2.7 | 30s-loop | ARG 20 | A | VdWContact |
| Gln 37 | B2.1 | B2 | ALA 65 | A | Hydrophobic |
| Gln 37 | B2.1 | B2 | ALA 65 | A | VdWContact |
| Gln 59 | H.4 | Helix | LEU 66 | A | Hydrophobic |
| Glu 63 | H.8 | Helix | LEU 36 | A | Hydrophobic |
| His 25 | B1.4 | B1 | LEU 29 | A | Hydrophobic |
| His 25 | B1.4 | B1 | LEU 29 | A | VdWContact |
| His 25 | B1.4 | B1 | LYS 27 | A | Hydrophobic |
| His 25 | B1.4 | B1 | ILE 28 | A | VdWContact |
| Ile 28 | B1.7 | B1 | LEU 26 | A | HBAcceptor |
| Ile 28 | B1.7 | B1 | LEU 26 | A | HBDonor |
| Ile 28 | B1.7 | B1 | LEU 26 | A | VdWContact |
| Ile 28 | B1.7 | B1 | ALA 65 | A | Hydrophobic |
| Ile 28 | B1.7 | B1 | LEU 62 | A | Hydrophobic |
| Ile 28 | B1.7 | B1 | LEU 62 | A | VdWContact |
| Ile 28 | B1.7 | B1 | ILE 28 | A | Hydrophobic |
| Ile 28 | B1.7 | B1 | TYR 61 | A | Hydrophobic |
| Ile 28 | B1.7 | B1 | TYR 61 | A | HBAcceptor |
| Ile 28 | B1.7 | B1 | TYR 61 | A | VdWContact |
| Ile 38 | B2.2 | B2 | ALA 65 | A | Hydrophobic |
| Ile 38 | B2.2 | B2 | LEU 66 | A | Hydrophobic |
| Ile 58 | H.3 | Helix | LEU 66 | A | Hydrophobic |
| Leu 26 | B1.5 | B1 | LYS 27 | A | VdWContact |
| Leu 26 | B1.5 | B1 | ILE 28 | A | HBAcceptor |
| Leu 26 | B1.5 | B1 | ILE 28 | A | HBDonor |
| Leu 26 | B1.5 | B1 | ILE 28 | A | VdWContact |
| Leu 29 | b1b2.4 | 30s-loop | HIS 25 | A | Hydrophobic |
| Leu 62 | H.7 | Helix | LEU 66 | A | Hydrophobic |
| Leu 62 | H.7 | Helix | LEU 62 | A | Hydrophobic |
| Leu 62 | H.7 | Helix | ILE 28 | A | Hydrophobic |
| Leu 62 | H.7 | Helix | ILE 28 | A | VdWContact |
| Leu 66 | CT.1 | C-term | LEU 66 | A | Hydrophobic |
| Leu 66 | CT.1 | C-term | LEU 66 | A | VdWContact |
| Leu 66 | CT.1 | C-term | GLN 59 | A | VdWContact |
| Leu 66 | CT.1 | C-term | LEU 62 | A | Hydrophobic |
| Lys 27 | B1.6 | B1 | LEU 26 | A | VdWContact |
| Lys 27 | B1.6 | B1 | HIS 25 | A | Hydrophobic |
| Lys 27 | B1.6 | B1 | HIS 25 | A | CationPi |
| Lys 54 | b3h.3 | 50s-loop | LEU 66 | A | HBDonor |
| Lys 54 | b3h.3 | 50s-loop | LEU 66 | A | VdWContact |
| Lys 54 | b3h.3 | 50s-loop | ASN 67 | A | Cationic |
| Lys 54 | b3h.3 | 50s-loop | ASN 67 | A | VdWContact |
| Tyr 61 | H.6 | Helix | LEU 29 | A | VdWContact |
| Tyr 61 | H.6 | Helix | ILE 28 | A | Hydrophobic |
| Tyr 61 | H.6 | Helix | ILE 28 | A | HBDonor |
| Tyr 61 | H.6 | Helix | ILE 28 | A | VdWContact |
| Tyr 61 | H.6 | Helix | ASN 30 | A | Hydrophobic |
| Tyr 61 | H.6 | Helix | ASN 30 | A | HBAcceptor |
| Tyr 61 | H.6 | Helix | ASN 30 | A | VdWContact |
Showing 1 to 63 of 63 entries
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