Interactions for 2NYZ — Binding Partner: M3 protein


Structure details

  • Chemokine Chain: E
  • Partner Chain: A,B
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Chemokine diagram

E G S L R A 30s-loop K R G L 40s-loop D P Q A 50s-loopC-term D K R T C V S L T T Q R L P V S R N-term T I T Y T K I V I F I T A C V K T W V R D V V R S M D R K S N T R N N
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 8 60 N-term ALA 275 B Hydrophobic
Lys 8 60 N-term ALA 275 B HBAcceptor
Lys 8 60 N-term ALA 275 B VdWContact
Arg 9 61 N-term PRO 272 B Hydrophobic
Arg 9 61 N-term PRO 272 B VdWContact
Arg 9 61 N-term LEU 273 B VdWContact
Thr 10 62 N-term ALA 275 B Hydrophobic
Thr 10 62 N-term ALA 275 B VdWContact
Thr 10 62 N-term LEU 273 B HBAcceptor
Thr 10 62 N-term LEU 273 B HBDonor
Thr 10 62 N-term LEU 273 B VdWContact
Val 12 68 N-loop TYR 266 B Hydrophobic
Val 12 68 N-loop TYR 266 B VdWContact
Val 12 68 N-loop PRO 360 B Hydrophobic
Ser 13 69 N-loop VAL 270 B VdWContact
Ser 13 69 N-loop SER 269 B VdWContact
Thr 15 71 N-loop VAL 270 B VdWContact
Thr 16 72 N-loop TYR 127 A Hydrophobic
Thr 16 72 N-loop TYR 127 A VdWContact
Gln 17 73 N-loop TYR 127 A Hydrophobic
Gln 17 73 N-loop TYR 127 A VdWContact
Gln 17 73 N-loop GLN 84 A HBAcceptor
Gln 17 73 N-loop GLN 84 A VdWContact
Gln 17 73 N-loop THR 172 A Hydrophobic
Gln 17 73 N-loop THR 172 A VdWContact
Arg 18 74 N-loop TYR 125 A Hydrophobic
Arg 18 74 N-loop TYR 125 A HBDonor
Arg 18 74 N-loop TYR 125 A CationPi
Arg 18 74 N-loop TYR 125 A VdWContact
Arg 18 74 N-loop LEU 174 A Hydrophobic
Arg 18 74 N-loop GLU 123 A Cationic
Leu 19 75 N-loop LEU 82 A Hydrophobic
Pro 20 76 N-loop LEU 174 A Hydrophobic
Pro 20 76 N-loop LEU 174 A VdWContact
Arg 23 82 N-loop GLU 80 A HBDonor
Arg 23 82 N-loop GLU 80 A Cationic
Arg 23 82 N-loop GLU 80 A VdWContact
Ile 38 102 B2 PRO 272 B Hydrophobic
Ile 38 102 B2 PRO 272 B VdWContact
Thr 41 105 B2 LEU 82 A Hydrophobic
Arg 43 112 40s-loop GLU 81 A VdWContact
Leu 45 114 40s-loop LEU 82 A Hydrophobic
Leu 45 114 40s-loop GLU 81 A Hydrophobic
Leu 45 114 40s-loop LYS 228 B Hydrophobic
Lys 46 115 B3 SER 271 B HBAcceptor
Lys 46 115 B3 SER 271 B VdWContact
Val 47 116 B3 VAL 270 B Hydrophobic
Val 47 116 B3 VAL 270 B VdWContact
Val 47 116 B3 LEU 82 A Hydrophobic
Cys 48 117 B3 VAL 270 B HBDonor
Cys 48 117 B3 VAL 270 B VdWContact

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