Interactions for 1RHP — Binding Partner: CXCL4


Structure details

  • Chemokine Chain: D
  • Partner Chain: A,B,C
Download PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

I K A G P H C P T A 30s-loop K N G R 40s-loop D L Q A 50s-loopC-term D L Q C L C V K T T S Q V R P R N-term V E L S T I H Q L I A T L L C I K P L Y K K I I K K L L E S

Interactions for this Binding Partner

Download list as CSV
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 7 NTc.Cm3 N-term VAL 13 B HBAcceptor
Asp 7 NTc.Cm3 N-term VAL 13 B VdWContact
Asp 7 NTc.Cm3 N-term LYS 14 B HBAcceptor
Asp 7 NTc.Cm3 N-term LYS 14 B VdWContact
Leu 8 NTc.Cm2 N-term LEU 11 B Hydrophobic
Leu 8 NTc.Cm2 N-term LEU 11 B VdWContact
Leu 8 NTc.Cm2 N-term LYS 50 B Hydrophobic
Leu 8 NTc.Cm2 N-term LYS 50 B VdWContact
Gln 9 NTc.Cm1 N-term CYS 10 B HBDonor
Gln 9 NTc.Cm1 N-term CYS 10 B VdWContact
Gln 9 NTc.Cm1 N-term LEU 11 B HBDonor
Gln 9 NTc.Cm1 N-term LEU 11 B VdWContact
Gln 9 NTc.Cm1 N-term VAL 13 B Hydrophobic
Cys 10 CX.1 CX GLN 9 B VdWContact
Leu 11 CX.4 CX LEU 11 B Hydrophobic
Leu 11 CX.4 CX LEU 11 B VdWContact
Leu 11 CX.4 CX GLN 9 B HBAcceptor
Leu 11 CX.4 CX GLN 9 B VdWContact
Val 13 cxb1.1 N-loop ASP 7 B Hydrophobic
Val 13 cxb1.1 N-loop ASP 7 B VdWContact
Val 13 cxb1.1 N-loop GLN 9 B Hydrophobic
Val 13 cxb1.1 N-loop GLN 9 B VdWContact
Val 13 cxb1.1 N-loop LEU 8 B Hydrophobic
Val 13 cxb1.1 N-loop LEU 8 B VdWContact
Lys 14 cxb1.2 N-loop ASP 7 B Cationic
Arg 22 cxb1.16 N-loop LYS 31 C VdWContact
Thr 25 B1.3 B1 ARG 49 A VdWContact
Thr 25 B1.3 B1 ILE 30 C Hydrophobic
Thr 25 B1.3 B1 ILE 30 C VdWContact
Thr 25 B1.3 B1 ASN 47 A VdWContact
Thr 25 B1.3 B1 LYS 31 C HBAcceptor
Thr 25 B1.3 B1 LYS 31 C VdWContact
Ser 26 B1.4 B1 GLU 28 C HBDonor
Ser 26 B1.4 B1 VAL 29 C VdWContact
Leu 27 B1.5 B1 VAL 29 C HBAcceptor
Leu 27 B1.5 B1 VAL 29 C HBDonor
Leu 27 B1.5 B1 VAL 29 C VdWContact
Glu 28 B1.6 B1 LEU 27 C VdWContact
Glu 28 B1.6 B1 GLU 28 C Hydrophobic
Glu 28 B1.6 B1 GLU 28 C VdWContact
Val 29 B1.7 B1 LEU 27 C HBAcceptor
Val 29 B1.7 B1 LEU 27 C HBDonor
Val 29 B1.7 B1 LEU 27 C VdWContact
Val 29 B1.7 B1 LEU 67 C Hydrophobic
Val 29 B1.7 B1 SER 26 C VdWContact
Val 29 B1.7 B1 LEU 68 C Hydrophobic
Ile 30 b1b2.4 30s-loop THR 25 C VdWContact
Lys 31 b1b2.6 30s-loop THR 25 C HBDonor
Lys 31 b1b2.6 30s-loop THR 25 C VdWContact
Lys 31 b1b2.6 30s-loop LEU 67 C Hydrophobic
Lys 31 b1b2.6 30s-loop LYS 46 C VdWContact
Pro 34 b1b2.9 30s-loop ARG 49 B Hydrophobic
Leu 41 B2.2 B2 LEU 68 C Hydrophobic
Leu 41 B2.2 B2 LEU 68 C VdWContact
Lys 46 b2b3.2 40s-loop ASN 47 A VdWContact
Cys 52 B3.3 B3 ASP 7 B VdWContact
Leu 55 b3h.2 50s-loop LEU 68 C Hydrophobic
Leu 55 b3h.2 50s-loop LEU 68 C VdWContact
Leu 55 b3h.2 50s-loop SER 70 C VdWContact
Tyr 60 H.3 Helix LEU 68 C Hydrophobic
Tyr 60 H.3 Helix LEU 68 C VdWContact
Ile 64 H.7 Helix ILE 64 C Hydrophobic
Ile 64 H.7 Helix ILE 64 C VdWContact
Leu 67 H.10 Helix ALA 39 C VdWContact
Leu 67 H.10 Helix LYS 31 C Hydrophobic
Leu 67 H.10 Helix VAL 29 C Hydrophobic
Leu 68 CT.1 C-term LEU 55 C Hydrophobic
Leu 68 CT.1 C-term LEU 55 C VdWContact
Leu 68 CT.1 C-term VAL 29 C Hydrophobic
Leu 68 CT.1 C-term LEU 41 C Hydrophobic
Leu 68 CT.1 C-term LEU 41 C VdWContact
Leu 68 CT.1 C-term TYR 60 C Hydrophobic
Leu 68 CT.1 C-term TYR 60 C VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)