Interactions for 2NYZ — Binding Partner: M3 protein


Structure details

  • Chemokine Chain: D
  • Partner Chain: A,B
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Chemokine diagram

E G S L R A 30s-loop K R G L 40s-loop D P Q A 50s-loopC-term D K R T C V S L T T Q R L P V S R N-term T I T Y T K I V I F I T A C V K T W V R D V V R S M D R K S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 8 60 N-term ALA 275 A Hydrophobic
Lys 8 60 N-term ALA 275 A HBAcceptor
Lys 8 60 N-term ALA 275 A VdWContact
Arg 9 61 N-term PRO 274 A VdWContact
Arg 9 61 N-term LEU 273 A VdWContact
Arg 9 61 N-term PRO 272 A Hydrophobic
Arg 9 61 N-term PRO 272 A VdWContact
Thr 10 62 N-term LEU 273 A HBAcceptor
Thr 10 62 N-term LEU 273 A HBDonor
Thr 10 62 N-term LEU 273 A VdWContact
Thr 10 62 N-term PRO 272 A VdWContact
Val 12 68 N-loop TYR 266 A Hydrophobic
Val 12 68 N-loop TYR 266 A VdWContact
Val 12 68 N-loop LEU 273 A Hydrophobic
Val 12 68 N-loop THR 357 A VdWContact
Val 12 68 N-loop PRO 360 A Hydrophobic
Ser 13 69 N-loop SER 269 A VdWContact
Thr 15 71 N-loop VAL 270 A VdWContact
Thr 16 72 N-loop TYR 127 B VdWContact
Gln 17 73 N-loop GLN 84 B HBDonor
Gln 17 73 N-loop GLN 84 B VdWContact
Gln 17 73 N-loop THR 172 B Hydrophobic
Gln 17 73 N-loop THR 172 B VdWContact
Gln 17 73 N-loop TYR 127 B Hydrophobic
Arg 18 74 N-loop ASP 141 B Cationic
Arg 18 74 N-loop TYR 125 B Hydrophobic
Arg 18 74 N-loop TYR 125 B HBDonor
Arg 18 74 N-loop TYR 125 B VdWContact
Leu 19 75 N-loop LEU 82 B Hydrophobic
Pro 20 76 N-loop LEU 174 B Hydrophobic
Pro 20 76 N-loop LEU 174 B VdWContact
Pro 20 76 N-loop LEU 82 B VdWContact
Arg 23 82 N-loop GLU 80 B HBDonor
Arg 23 82 N-loop GLU 80 B Cationic
Arg 23 82 N-loop GLU 80 B VdWContact
Ile 38 102 B2 PRO 272 A Hydrophobic
Ile 38 102 B2 PRO 272 A VdWContact
Arg 43 112 40s-loop GLU 81 B VdWContact
Arg 43 112 40s-loop GLU 80 B VdWContact
Leu 45 114 40s-loop THR 226 A Hydrophobic
Leu 45 114 40s-loop LEU 82 B Hydrophobic
Lys 46 115 B3 SER 271 A HBAcceptor
Lys 46 115 B3 SER 271 A VdWContact
Lys 46 115 B3 PRO 272 A Hydrophobic
Lys 46 115 B3 PRO 272 A VdWContact
Cys 48 117 B3 VAL 270 A HBDonor
Cys 48 117 B3 VAL 270 A VdWContact
Cys 48 117 B3 PRO 272 A VdWContact

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