Interactions for 1ROD — Binding Partner: CXCL8
Structure details
- PDB ID: 1ROD open_in_new
- Protein: CXCL8_HUMAN
- Organism: Homo sapiens
- UniProt ID: P10145 open_in_new
- Method: Nmr
- Resolution:
- Date: June 10, 1996
- Reference: 10.1111/J.1432-1033.1996.00026.X open_in_new
- State: Dimer
- Chemokine Chain: B
- Partner Chain: A
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Lys 20 | cxb1.16 | N-loop | GLU 29 | A | VdWContact |
| Ile 22 | B1.2 | B1 | GLU 29 | A | Hydrophobic |
| Ile 22 | B1.2 | B1 | GLU 29 | A | VdWContact |
| Lys 23 | B1.3 | B1 | ASN 36 | A | Hydrophobic |
| Lys 23 | B1.3 | B1 | ASN 36 | A | VdWContact |
| Lys 23 | B1.3 | B1 | ILE 28 | A | VdWContact |
| Lys 23 | B1.3 | B1 | GLU 29 | A | HBAcceptor |
| Lys 23 | B1.3 | B1 | GLU 29 | A | VdWContact |
| Lys 23 | B1.3 | B1 | SER 30 | A | VdWContact |
| Lys 23 | B1.3 | B1 | VAL 27 | A | VdWContact |
| Glu 24 | B1.4 | B1 | ARG 26 | A | Hydrophobic |
| Glu 24 | B1.4 | B1 | ARG 26 | A | Anionic |
| Glu 24 | B1.4 | B1 | ARG 26 | A | VdWContact |
| Glu 24 | B1.4 | B1 | ILE 28 | A | Hydrophobic |
| Glu 24 | B1.4 | B1 | ILE 28 | A | VdWContact |
| Glu 24 | B1.4 | B1 | VAL 27 | A | VdWContact |
| Leu 25 | B1.5 | B1 | ARG 26 | A | VdWContact |
| Leu 25 | B1.5 | B1 | LEU 25 | A | VdWContact |
| Leu 25 | B1.5 | B1 | VAL 27 | A | Hydrophobic |
| Leu 25 | B1.5 | B1 | VAL 27 | A | HBAcceptor |
| Leu 25 | B1.5 | B1 | VAL 27 | A | HBDonor |
| Leu 25 | B1.5 | B1 | VAL 27 | A | VdWContact |
| Arg 26 | B1.6 | B1 | GLU 24 | A | Hydrophobic |
| Arg 26 | B1.6 | B1 | GLU 24 | A | Cationic |
| Arg 26 | B1.6 | B1 | GLU 24 | A | VdWContact |
| Arg 26 | B1.6 | B1 | ARG 26 | A | Hydrophobic |
| Arg 26 | B1.6 | B1 | ARG 26 | A | VdWContact |
| Arg 26 | B1.6 | B1 | LEU 25 | A | VdWContact |
| Val 27 | B1.7 | B1 | GLU 24 | A | VdWContact |
| Val 27 | B1.7 | B1 | LEU 25 | A | Hydrophobic |
| Val 27 | B1.7 | B1 | LEU 25 | A | HBAcceptor |
| Val 27 | B1.7 | B1 | LEU 25 | A | HBDonor |
| Val 27 | B1.7 | B1 | LEU 25 | A | VdWContact |
| Val 27 | B1.7 | B1 | LYS 23 | A | VdWContact |
| Ile 28 | b1b2.4 | 30s-loop | GLU 24 | A | Hydrophobic |
| Ile 28 | b1b2.4 | 30s-loop | GLU 24 | A | VdWContact |
| Ile 28 | b1b2.4 | 30s-loop | LYS 23 | A | VdWContact |
| Glu 29 | b1b2.6 | 30s-loop | LYS 20 | A | VdWContact |
| Glu 29 | b1b2.6 | 30s-loop | ILE 22 | A | Hydrophobic |
| Glu 29 | b1b2.6 | 30s-loop | ILE 22 | A | VdWContact |
| Glu 29 | b1b2.6 | 30s-loop | LYS 23 | A | HBDonor |
| Glu 29 | b1b2.6 | 30s-loop | LYS 23 | A | VdWContact |
| Ser 30 | b1b2.7 | 30s-loop | LYS 23 | A | VdWContact |
| Asn 36 | b1b2.14 | 30s-loop | LYS 23 | A | Hydrophobic |
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