Interactions for 2RA4 — Binding Partner: CCL13


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

T S R C P Q K A 30s-loop K L G K 40s-loop D P K E 50s-loopC-term D A L N V P S T C C F T F S S K K I S L Q R N-term T I V Y S K L V I F R T A C I E K W V Q N Y M K H L G
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 3 55 N-term LYS 18 B Hydrophobic
Ala 4 56 N-term LYS 18 B HBAcceptor
Ala 4 56 N-term LYS 18 B VdWContact
Ala 4 56 N-term SER 17 B HBAcceptor
Ala 4 56 N-term SER 17 B HBDonor
Ala 4 56 N-term SER 17 B VdWContact
Leu 5 57 N-term ILE 20 B Hydrophobic
Leu 5 57 N-term ILE 50 B Hydrophobic
Leu 5 57 N-term ILE 50 B VdWContact
Leu 5 57 N-term LYS 18 B Hydrophobic
Leu 5 57 N-term LYS 18 B VdWContact
Asn 6 58 N-term SER 16 B HBDonor
Asn 6 58 N-term SER 16 B VdWContact
Asn 6 58 N-term CYS 51 B HBAcceptor
Asn 6 58 N-term CYS 51 B VdWContact
Asn 6 58 N-term THR 14 B VdWContact
Val 7 59 N-term GLU 49 B VdWContact
Val 7 59 N-term CYS 51 B VdWContact
Pro 8 60 N-term GLU 49 B Hydrophobic
Pro 8 60 N-term THR 10 B Hydrophobic
Pro 8 60 N-term THR 10 B VdWContact
Pro 8 60 N-term CYS 51 B VdWContact
Pro 8 60 N-term ILE 41 B Hydrophobic
Ser 9 61 N-term CYS 11 B HBAcceptor
Ser 9 61 N-term CYS 11 B HBDonor
Ser 9 61 N-term CYS 11 B VdWContact
Ser 9 61 N-term THR 10 B VdWContact
Ser 9 61 N-term PHE 13 B VdWContact
Thr 10 62 N-term SER 9 B VdWContact
Thr 10 62 N-term PRO 8 B Hydrophobic
Thr 10 62 N-term PRO 8 B VdWContact
Cys 11 63 CX SER 9 B HBAcceptor
Cys 11 63 CX SER 9 B HBDonor
Cys 11 63 CX SER 9 B VdWContact
Phe 13 68 N-loop ARG 34 B Hydrophobic
Phe 13 68 N-loop SER 9 B VdWContact
Thr 14 69 N-loop ASN 6 B HBDonor
Thr 14 69 N-loop ASN 6 B VdWContact
Ser 16 71 N-loop ASN 6 B HBAcceptor
Ser 16 71 N-loop ASN 6 B VdWContact
Ser 17 72 N-loop ALA 4 B HBAcceptor
Ser 17 72 N-loop ALA 4 B HBDonor
Ser 17 72 N-loop ALA 4 B VdWContact
Lys 18 73 N-loop ASP 3 B Hydrophobic
Lys 18 73 N-loop ALA 4 B HBDonor
Lys 18 73 N-loop ALA 4 B VdWContact
Lys 18 73 N-loop LEU 5 B Hydrophobic
Lys 18 73 N-loop LEU 5 B VdWContact
Ile 20 75 N-loop LEU 5 B Hydrophobic
Arg 34 94 30s-loop PHE 13 B Hydrophobic
Arg 34 94 30s-loop PHE 13 B VdWContact
Pro 36 96 30s-loop PRO 36 B Hydrophobic
Ile 41 102 B2 PRO 8 B Hydrophobic
Lys 48 114 40s-loop LEU 5 B Hydrophobic
Glu 49 115 B3 PRO 8 B Hydrophobic
Glu 49 115 B3 VAL 7 B VdWContact
Ile 50 116 B3 LEU 5 B Hydrophobic
Ile 50 116 B3 LEU 5 B VdWContact
Cys 51 117 B3 PRO 8 B VdWContact
Cys 51 117 B3 ASN 6 B HBDonor
Cys 51 117 B3 ASN 6 B VdWContact

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