Interactions for 2RA4 — Binding Partner: CCL13


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

T S R C P Q K A 30s-loop K L G K 40s-loop D P K E 50s-loopC-term D A L N V P S T C C F T F S S K K I S L Q R N-term T I V Y S K L V I F R T A C I E K W V Q N Y M K H L G
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Asp 3 55 N-term LYS 18 A Hydrophobic
Ala 4 56 N-term LYS 18 A HBAcceptor
Ala 4 56 N-term LYS 18 A VdWContact
Ala 4 56 N-term SER 17 A HBAcceptor
Ala 4 56 N-term SER 17 A HBDonor
Ala 4 56 N-term SER 17 A VdWContact
Leu 5 57 N-term LYS 18 A Hydrophobic
Leu 5 57 N-term LYS 18 A VdWContact
Leu 5 57 N-term ILE 50 A Hydrophobic
Leu 5 57 N-term ILE 50 A VdWContact
Leu 5 57 N-term LYS 48 A Hydrophobic
Leu 5 57 N-term ILE 20 A Hydrophobic
Asn 6 58 N-term SER 16 A HBDonor
Asn 6 58 N-term SER 16 A VdWContact
Asn 6 58 N-term CYS 51 A HBAcceptor
Asn 6 58 N-term CYS 51 A VdWContact
Asn 6 58 N-term THR 14 A HBAcceptor
Asn 6 58 N-term THR 14 A VdWContact
Val 7 59 N-term GLU 49 A VdWContact
Pro 8 60 N-term THR 10 A Hydrophobic
Pro 8 60 N-term THR 10 A VdWContact
Pro 8 60 N-term CYS 51 A VdWContact
Pro 8 60 N-term ILE 41 A Hydrophobic
Pro 8 60 N-term GLU 49 A Hydrophobic
Ser 9 61 N-term PHE 13 A VdWContact
Ser 9 61 N-term CYS 11 A HBAcceptor
Ser 9 61 N-term CYS 11 A HBDonor
Ser 9 61 N-term CYS 11 A VdWContact
Ser 9 61 N-term THR 10 A VdWContact
Thr 10 62 N-term PRO 8 A Hydrophobic
Thr 10 62 N-term PRO 8 A VdWContact
Thr 10 62 N-term SER 9 A VdWContact
Cys 11 63 CX SER 9 A HBAcceptor
Cys 11 63 CX SER 9 A HBDonor
Cys 11 63 CX SER 9 A VdWContact
Phe 13 68 N-loop ARG 34 A Hydrophobic
Phe 13 68 N-loop ARG 34 A VdWContact
Phe 13 68 N-loop SER 9 A VdWContact
Thr 14 69 N-loop ASN 6 A VdWContact
Ser 16 71 N-loop ASN 6 A HBAcceptor
Ser 16 71 N-loop ASN 6 A VdWContact
Ser 17 72 N-loop ALA 4 A HBAcceptor
Ser 17 72 N-loop ALA 4 A HBDonor
Ser 17 72 N-loop ALA 4 A VdWContact
Lys 18 73 N-loop ASP 3 A Hydrophobic
Lys 18 73 N-loop LEU 5 A Hydrophobic
Lys 18 73 N-loop LEU 5 A VdWContact
Lys 18 73 N-loop ALA 4 A HBDonor
Lys 18 73 N-loop ALA 4 A VdWContact
Ile 20 75 N-loop LEU 5 A Hydrophobic
Arg 34 94 30s-loop PHE 13 A Hydrophobic
Pro 36 96 30s-loop PRO 36 A Hydrophobic
Ile 41 102 B2 PRO 8 A Hydrophobic
Glu 49 115 B3 VAL 7 A VdWContact
Glu 49 115 B3 PRO 8 A Hydrophobic
Ile 50 116 B3 LEU 5 A Hydrophobic
Ile 50 116 B3 LEU 5 A VdWContact
Cys 51 117 B3 ASN 6 A HBDonor
Cys 51 117 B3 ASN 6 A VdWContact
Cys 51 117 B3 VAL 7 A VdWContact
Cys 51 117 B3 PRO 8 A VdWContact

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