Interactions for 1U4L — Binding Partner: CCL5


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term S S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ser 4 NTc.Cm6 N-term GLN 48 A HBAcceptor
Ser 4 NTc.Cm6 N-term GLN 48 A VdWContact
Ser 4 NTc.Cm6 N-term ARG 47 A VdWContact
Ser 5 NTc.Cm5 N-term GLN 48 A VdWContact
Asp 6 NTc.Cm4 N-term GLN 48 A HBDonor
Asp 6 NTc.Cm4 N-term GLN 48 A VdWContact
Thr 7 NTc.Cm3 N-term VAL 40 A Hydrophobic
Thr 7 NTc.Cm3 N-term PRO 9 A Hydrophobic
Thr 8 NTc.Cm2 N-term PHE 12 A Hydrophobic
Thr 8 NTc.Cm2 N-term PHE 12 A VdWContact
Thr 8 NTc.Cm2 N-term CYS 10 A HBAcceptor
Thr 8 NTc.Cm2 N-term CYS 10 A HBDonor
Thr 8 NTc.Cm2 N-term CYS 10 A VdWContact
Pro 9 NTc.Cm1 N-term THR 7 A Hydrophobic
Cys 10 CX.1 CX THR 7 A VdWContact
Cys 10 CX.1 CX THR 8 A HBAcceptor
Cys 10 CX.1 CX THR 8 A HBDonor
Cys 10 CX.1 CX THR 8 A VdWContact
Phe 12 cxb1.1 N-loop LYS 33 A Hydrophobic
Phe 12 cxb1.1 N-loop LYS 33 A VdWContact
Phe 12 cxb1.1 N-loop TYR 3 A Hydrophobic
Phe 12 cxb1.1 N-loop THR 8 A Hydrophobic
Phe 12 cxb1.1 N-loop CYS 10 A VdWContact
Ala 13 cxb1.2 N-loop TYR 3 A Hydrophobic
Ala 13 cxb1.2 N-loop SER 4 A VdWContact
Lys 33 b1b2.10 30s-loop PHE 12 A Hydrophobic
Val 40 B2.3 B2 THR 7 A Hydrophobic
Arg 47 b2b3.12 40s-loop ASP 6 A Cationic
Arg 47 b2b3.12 40s-loop ASP 6 A VdWContact
Gln 48 B3.1 B3 ASP 6 A VdWContact
Gln 48 B3.1 B3 THR 7 A Hydrophobic
Gln 48 B3.1 B3 THR 7 A HBAcceptor
Gln 48 B3.1 B3 THR 7 A VdWContact
Cys 50 B3.3 B3 SER 5 A HBDonor
Cys 50 B3.3 B3 SER 5 A VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)