Interactions for 1U4M — Binding Partner: CCL5


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term P Y S S D T T P C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Tyr 3 NTc.Cm7 N-term PHE 12 B Hydrophobic
Tyr 3 NTc.Cm7 N-term ALA 13 B Hydrophobic
Ser 4 NTc.Cm6 N-term ALA 13 B VdWContact
Ser 5 NTc.Cm5 N-term CYS 50 B HBAcceptor
Ser 5 NTc.Cm5 N-term CYS 50 B VdWContact
Asp 6 NTc.Cm4 N-term ARG 47 B HBAcceptor
Asp 6 NTc.Cm4 N-term ARG 47 B Anionic
Asp 6 NTc.Cm4 N-term ARG 47 B VdWContact
Asp 6 NTc.Cm4 N-term GLN 48 B VdWContact
Thr 7 NTc.Cm3 N-term VAL 40 B Hydrophobic
Thr 7 NTc.Cm3 N-term CYS 10 B VdWContact
Thr 7 NTc.Cm3 N-term GLN 48 B Hydrophobic
Thr 7 NTc.Cm3 N-term GLN 48 B HBDonor
Thr 7 NTc.Cm3 N-term GLN 48 B VdWContact
Thr 7 NTc.Cm3 N-term PRO 9 B Hydrophobic
Thr 7 NTc.Cm3 N-term PRO 9 B VdWContact
Thr 8 NTc.Cm2 N-term CYS 10 B HBAcceptor
Thr 8 NTc.Cm2 N-term CYS 10 B HBDonor
Thr 8 NTc.Cm2 N-term CYS 10 B VdWContact
Pro 9 NTc.Cm1 N-term THR 7 B Hydrophobic
Cys 10 CX.1 CX PHE 12 B VdWContact
Cys 10 CX.1 CX THR 8 B HBAcceptor
Cys 10 CX.1 CX THR 8 B HBDonor
Cys 10 CX.1 CX THR 8 B VdWContact
Phe 12 cxb1.1 N-loop LYS 33 B Hydrophobic
Phe 12 cxb1.1 N-loop THR 8 B Hydrophobic
Phe 12 cxb1.1 N-loop THR 8 B VdWContact
Phe 12 cxb1.1 N-loop CYS 10 B VdWContact
Ala 13 cxb1.2 N-loop SER 4 B VdWContact
Lys 33 b1b2.10 30s-loop PHE 12 B Hydrophobic
Lys 33 b1b2.10 30s-loop PHE 12 B VdWContact
Val 40 B2.3 B2 THR 7 B Hydrophobic
Cys 50 B3.3 B3 SER 5 B HBDonor
Cys 50 B3.3 B3 SER 5 B VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)