Interactions

2N54 | XCL1_HUMAN — XCL1

Residue contacts: 50
SUMMARY
Protein
XCL1_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P47992 View on UniProt
PDB ID
2N54 View on PDB
Method
Nmr
Resolution
-
Date
Oct. 7, 2015
Reference
10.1021/ACSCHEMBIO.5B00542 Open DOI
State
Dimer
Chain information
Chemokine chain
A
Partner chain
B
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Val 12 cxb1.1 N-loop LEU 214 B Hydrophobic
Val 12 cxb1.1 N-loop LEU 214 B VdWContact
Val 12 cxb1.1 N-loop THR 216 B Hydrophobic
Leu 14 cxb1.5 N-loop VAL 212 B Hydrophobic
Leu 14 cxb1.5 N-loop VAL 212 B VdWContact
Leu 14 cxb1.5 N-loop LEU 214 B Hydrophobic
Leu 14 cxb1.5 N-loop LEU 214 B VdWContact
Thr 16 cxb1.7 N-loop VAL 212 B Hydrophobic
Gln 17 cxb1.8 N-loop THR 210 B HBDonor
Gln 17 cxb1.8 N-loop THR 210 B VdWContact
Gln 17 cxb1.8 N-loop CYS 249 B VdWContact
Gln 17 cxb1.8 N-loop PRO 251 B VdWContact
Leu 19 cxb1.11 N-loop PRO 251 B Hydrophobic
Ser 22 cxb1.16 N-loop GLU 231 B HBDonor
Ser 22 cxb1.16 N-loop GLU 231 B VdWContact
Arg 23 B1.1 B1 GLU 231 B HBDonor
Arg 23 B1.1 B1 GLU 231 B VdWContact
Lys 25 B1.3 B1 GLU 231 B Hydrophobic
Lys 25 B1.3 B1 GLU 231 B Cationic
Lys 25 B1.3 B1 GLU 231 B VdWContact
Tyr 27 B1.5 B1 ILE 229 B Hydrophobic
Tyr 27 B1.5 B1 ILE 229 B VdWContact
Ile 29 B1.7 B1 ILE 238 B Hydrophobic
Ile 29 B1.7 B1 ILE 240 B Hydrophobic
Ile 29 B1.7 B1 ILE 240 B VdWContact
Ile 29 B1.7 B1 TYR 227 B Hydrophobic
Glu 31 b1b2.6 30s-loop SER 222 B HBAcceptor
Glu 31 b1b2.6 30s-loop SER 222 B VdWContact
Glu 31 b1b2.6 30s-loop VAL 221 B VdWContact
Glu 31 b1b2.6 30s-loop ILE 240 B Hydrophobic
Glu 31 b1b2.6 30s-loop LYS 225 B Hydrophobic
Glu 31 b1b2.6 30s-loop LYS 225 B Anionic
Glu 31 b1b2.6 30s-loop LYS 225 B VdWContact
Glu 31 b1b2.6 30s-loop ARG 223 B HBAcceptor
Glu 31 b1b2.6 30s-loop ARG 223 B VdWContact
Ile 38 B2.3 B2 ILE 238 B Hydrophobic
Ile 38 B2.3 B2 ILE 238 B VdWContact
Ile 40 B2.5 B2 ILE 229 B Hydrophobic
Ile 40 B2.5 B2 ILE 229 B VdWContact
Ile 40 B2.5 B2 GLU 231 B Hydrophobic
Leu 45 b2b3.12 40s-loop CYS 249 B Hydrophobic
Leu 45 b2b3.12 40s-loop CYS 249 B VdWContact
Leu 45 b2b3.12 40s-loop VAL 247 B Hydrophobic
Leu 45 b2b3.12 40s-loop VAL 247 B VdWContact
Val 47 B3.2 B3 LEU 245 B Hydrophobic
Val 47 B3.2 B3 LEU 245 B VdWContact
Val 47 B3.2 B3 LEU 214 B Hydrophobic
Ala 49 B3.4 B3 LEU 245 B VdWContact
Pro 51 b3h.2 50s-loop GLN 217 B VdWContact
Pro 51 b3h.2 50s-loop LEU 219 B Hydrophobic
CHEMOKINE DIAGRAM
T E G S L R 30s-loop K R G L 40s-loop D P Q A 50s-loopC-term V G S E V S D K R T C V S L T T Q R L P V S N-term I T Y T K I R C V I F I T C C V K T W V R D V V R S M D R K
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical