Interactions

2N54 | XCL1_HUMAN — XCL1

Residue contacts: 50
SUMMARY
Protein
XCL1_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P47992 View on UniProt
PDB ID
2N54 View on PDB
Method
Nmr
Resolution
-
Date
Oct. 7, 2015
Reference
10.1021/ACSCHEMBIO.5B00542 Open DOI
State
Dimer
Chain information
Chemokine chain
B
Partner chain
A
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Thr 210 CX.4 CX GLN 17 A HBAcceptor
Thr 210 CX.4 CX GLN 17 A VdWContact
Val 212 cxb1.1 N-loop LEU 14 A Hydrophobic
Val 212 cxb1.1 N-loop LEU 14 A VdWContact
Val 212 cxb1.1 N-loop THR 16 A Hydrophobic
Leu 214 cxb1.5 N-loop VAL 47 A Hydrophobic
Leu 214 cxb1.5 N-loop LEU 14 A Hydrophobic
Leu 214 cxb1.5 N-loop LEU 14 A VdWContact
Leu 214 cxb1.5 N-loop VAL 12 A Hydrophobic
Leu 214 cxb1.5 N-loop VAL 12 A VdWContact
Thr 216 cxb1.7 N-loop VAL 12 A Hydrophobic
Gln 217 cxb1.8 N-loop PRO 51 A VdWContact
Leu 219 cxb1.11 N-loop PRO 51 A Hydrophobic
Val 221 cxb1.15 N-loop GLU 31 A VdWContact
Ser 222 cxb1.16 N-loop GLU 31 A HBDonor
Ser 222 cxb1.16 N-loop GLU 31 A VdWContact
Arg 223 B1.1 B1 GLU 31 A HBDonor
Arg 223 B1.1 B1 GLU 31 A VdWContact
Lys 225 B1.3 B1 GLU 31 A Hydrophobic
Lys 225 B1.3 B1 GLU 31 A Cationic
Lys 225 B1.3 B1 GLU 31 A VdWContact
Tyr 227 B1.5 B1 ILE 29 A Hydrophobic
Ile 229 B1.7 B1 TYR 27 A Hydrophobic
Ile 229 B1.7 B1 TYR 27 A VdWContact
Ile 229 B1.7 B1 ILE 40 A Hydrophobic
Ile 229 B1.7 B1 ILE 40 A VdWContact
Glu 231 b1b2.6 30s-loop ILE 40 A Hydrophobic
Glu 231 b1b2.6 30s-loop LYS 25 A Hydrophobic
Glu 231 b1b2.6 30s-loop LYS 25 A Anionic
Glu 231 b1b2.6 30s-loop LYS 25 A VdWContact
Glu 231 b1b2.6 30s-loop SER 22 A HBAcceptor
Glu 231 b1b2.6 30s-loop SER 22 A VdWContact
Glu 231 b1b2.6 30s-loop ARG 23 A HBAcceptor
Glu 231 b1b2.6 30s-loop ARG 23 A VdWContact
Ile 238 B2.3 B2 ILE 38 A Hydrophobic
Ile 238 B2.3 B2 ILE 38 A VdWContact
Ile 238 B2.3 B2 ILE 29 A Hydrophobic
Ile 240 B2.5 B2 ILE 29 A Hydrophobic
Ile 240 B2.5 B2 ILE 29 A VdWContact
Ile 240 B2.5 B2 GLU 31 A Hydrophobic
Leu 245 b2b3.12 40s-loop VAL 47 A Hydrophobic
Leu 245 b2b3.12 40s-loop VAL 47 A VdWContact
Leu 245 b2b3.12 40s-loop CYS 49 A VdWContact
Val 247 B3.2 B3 LEU 45 A Hydrophobic
Val 247 B3.2 B3 LEU 45 A VdWContact
Ala 249 B3.4 B3 GLN 17 A VdWContact
Ala 249 B3.4 B3 LEU 45 A Hydrophobic
Ala 249 B3.4 B3 LEU 45 A VdWContact
Pro 251 b3h.2 50s-loop GLN 17 A VdWContact
Pro 251 b3h.2 50s-loop LEU 19 A Hydrophobic
CHEMOKINE DIAGRAM
T E G S L R 30s-loop K R G L 40s-loop D P Q A 50s-loopC-term V G S E V S D K R T C V S L T T Q R L P V S N-term I T Y T K I R C V I F I T C C V K T W V R D V V R S M D R K
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical