Interactions for 2BDN — Binding Partner: 11K2


Structure details

  • Chemokine Chain: A
  • Partner Chain: H,L
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Chemokine diagram

I T S S K C P K E 30s-loop I V A K 40s-loop D P K Q 50s-loopC-term A I N A P V T C C Y N F T N R K I S V Q N-term R R Y S A L R A V I F K T A C I E K W V Q D S M D H L D K Q T

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Arg 30 B1.7 B1 PHE 101 H Hydrophobic
Arg 30 B1.7 B1 PHE 101 H VdWContact
Thr 32 b1b2.6 30s-loop ARG 98 H HBAcceptor
Thr 32 b1b2.6 30s-loop ARG 98 H VdWContact
Thr 32 b1b2.6 30s-loop PHE 101 H Hydrophobic
Thr 32 b1b2.6 30s-loop PHE 101 H VdWContact
Thr 32 b1b2.6 30s-loop PHE 103 H Hydrophobic
Ser 34 b1b2.9 30s-loop GLU 1 H HBDonor
Ser 34 b1b2.9 30s-loop GLU 1 H VdWContact
Ser 34 b1b2.9 30s-loop TYR 106 H HBDonor
Ser 34 b1b2.9 30s-loop TYR 106 H VdWContact
Lys 38 b1b2.14 30s-loop ASP 31 H Hydrophobic
Lys 38 b1b2.14 30s-loop ASP 31 H Cationic
Glu 39 b1b2.16 30s-loop VAL 100 H Hydrophobic
Glu 39 b1b2.16 30s-loop VAL 100 H HBAcceptor
Glu 39 b1b2.16 30s-loop VAL 100 H VdWContact
Glu 39 b1b2.16 30s-loop ARG 98 H Anionic
Glu 39 b1b2.16 30s-loop PHE 101 H Hydrophobic
Glu 39 b1b2.16 30s-loop THR 32 H HBAcceptor
Glu 39 b1b2.16 30s-loop THR 32 H VdWContact
Ala 40 B2.1 B2 PHE 101 H VdWContact
Val 41 B2.2 B2 PHE 101 H Hydrophobic
Val 41 B2.2 B2 PHE 101 H VdWContact
Pro 55 b3h.2 50s-loop PHE 101 H Hydrophobic
Pro 55 b3h.2 50s-loop VAL 100 H Hydrophobic
Pro 55 b3h.2 50s-loop VAL 100 H VdWContact
Lys 56 b3h.3 50s-loop ASP 52 H HBDonor
Lys 56 b3h.3 50s-loop ASP 52 H Cationic
Lys 56 b3h.3 50s-loop ASP 52 H VdWContact
Lys 56 b3h.3 50s-loop TYR 33 H Hydrophobic
Lys 56 b3h.3 50s-loop THR 32 H HBDonor
Lys 56 b3h.3 50s-loop THR 32 H VdWContact
Lys 56 b3h.3 50s-loop LYS 30 H VdWContact
Lys 56 b3h.3 50s-loop VAL 100 H Hydrophobic
Met 64 H.7 Helix PHE 101 H Hydrophobic
Asp 65 H.8 Helix TRP 92 L Hydrophobic
Asp 65 H.8 Helix ARG 32 L HBAcceptor
Asp 65 H.8 Helix ARG 32 L Anionic
Asp 65 H.8 Helix ARG 32 L VdWContact
Asp 68 CT.1 C-term TYR 30 L Hydrophobic
Asp 68 CT.1 C-term TRP 92 L Hydrophobic
Asp 68 CT.1 C-term ARG 32 L HBAcceptor
Asp 68 CT.1 C-term ARG 32 L Anionic
Asp 68 CT.1 C-term ARG 32 L VdWContact
Lys 69 CT.2 C-term TRP 92 L VdWContact
Lys 69 CT.2 C-term TYR 30 L Hydrophobic
Lys 69 CT.2 C-term TYR 30 L VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)