Interactions for 2FIN — Binding Partner: rabbitpox encoded CC chemokine inhibitor


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

T S S L C S Q P 30s-loop A A S A 40s-loop D P S E 50s-loopC-term A P M G S D P P T A C C F S Y T A R K L P R N N-term E Y Y D V V F A V V F Q T A C V Q S W V Q E Y V Y D L E L N

Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Pro 8 NTc.Cm3 N-term THR 187 A Hydrophobic
Pro 8 NTc.Cm3 N-term THR 187 A VdWContact
Ala 10 NTc.Cm1 N-term ILE 184 A Hydrophobic
Ala 10 NTc.Cm1 N-term ILE 184 A VdWContact
Phe 13 cxb1.1 N-loop ALA 222 A Hydrophobic
Phe 13 cxb1.1 N-loop TYR 217 A Hydrophobic
Phe 13 cxb1.1 N-loop THR 183 A VdWContact
Ser 14 cxb1.2 N-loop GLY 181 A HBDonor
Ser 14 cxb1.2 N-loop GLY 181 A VdWContact
Ser 14 cxb1.2 N-loop SER 182 A VdWContact
Ser 14 cxb1.2 N-loop THR 183 A VdWContact
Ala 17 cxb1.7 N-loop GLU 143 A Hydrophobic
Arg 18 cxb1.8 N-loop ASP 141 A Cationic
Arg 18 cxb1.8 N-loop ASP 141 A VdWContact
Arg 18 cxb1.8 N-loop GLU 143 A Hydrophobic
Leu 20 cxb1.11 N-loop THR 78 A Hydrophobic
Pro 21 cxb1.14 N-loop GLU 72 A Hydrophobic
Pro 21 cxb1.14 N-loop GLU 72 A VdWContact
Asn 23 cxb1.16 N-loop GLU 72 A VdWContact
Phe 24 B1.1 B1 PRO 77 A Hydrophobic
Phe 24 B1.1 B1 GLU 72 A VdWContact
Phe 24 B1.1 B1 SER 54 A VdWContact
Phe 24 B1.1 B1 GLU 53 A Hydrophobic
Phe 24 B1.1 B1 GLU 53 A VdWContact
Arg 46 b2b3.4 40s-loop TYR 80 A VdWContact
Arg 46 b2b3.4 40s-loop ILE 51 A Hydrophobic
Arg 46 b2b3.4 40s-loop GLU 53 A Hydrophobic
Cys 51 B3.3 B3 SER 182 A HBDonor
Cys 51 B3.3 B3 SER 182 A VdWContact

Interaction pattern search
(0.00 = no similarity, 1.00 = identical)