Interactions for 5CBA — Binding Partner: 3b4


Structure details

  • Chemokine Chain: F
  • Partner Chain: C,D
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Chemokine diagram

P R G N G C P R K E 30s-loop K N K S 40s-loop D P Q A 50s-loopC-term S L R C R C V Q E S S V F I P R R F N-term L I Q I R D I I I V W K V C V I E W I Q R M M E V L R K
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Phe 18 74 N-loop PHE 54 C Hydrophobic
Arg 21 80 N-loop PRO 96 C HBDonor
Arg 21 80 N-loop PRO 96 C VdWContact
Arg 21 80 N-loop ILE 52 C Hydrophobic
Arg 21 80 N-loop TYR 32 C VdWContact
Arg 21 80 N-loop SER 31 C HBDonor
Arg 21 80 N-loop SER 31 C VdWContact
Arg 21 80 N-loop ASP 97 C Cationic
Arg 21 80 N-loop ASP 97 C VdWContact
Arg 21 80 N-loop GLU 95 C HBDonor
Arg 21 80 N-loop PRO 100 C Hydrophobic
Arg 22 81 N-loop ARG 93 D HBDonor
Arg 22 81 N-loop ARG 93 D VdWContact
Arg 22 81 N-loop TYR 91 D Hydrophobic
Arg 22 81 N-loop TYR 91 D VdWContact
Arg 22 81 N-loop ASP 95 D Cationic
Arg 22 81 N-loop EDO 201 C VdWContact
Ile 24 83 B1 PRO 100 C Hydrophobic
Asp 25 84 B1 TYR 30 D HBDonor
Asp 25 84 B1 TYR 30 D VdWContact
Arg 26 85 B1 TYR 100 C Hydrophobic
Arg 26 85 B1 TYR 100 C VdWContact
Arg 26 85 B1 SER 100 C HBDonor
Arg 26 85 B1 SER 100 C VdWContact
Ile 27 86 B1 TYR 100 C Hydrophobic
Ile 27 86 B1 TYR 100 C HBAcceptor
Ile 27 86 B1 TYR 100 C HBDonor
Ile 27 86 B1 TYR 100 C VdWContact
Ile 29 88 B1 TYR 99 C Hydrophobic
Lys 46 106 40s-loop TYR 30 D Hydrophobic
Lys 46 106 40s-loop TYR 30 D HBAcceptor
Lys 46 106 40s-loop TYR 30 D VdWContact
Lys 46 106 40s-loop TRP 32 D Hydrophobic
Lys 46 106 40s-loop TRP 32 D VdWContact
Lys 46 106 40s-loop ASP 100 C Cationic
Trp 59 124 Helix PHE 54 C Hydrophobic
Trp 59 124 Helix PHE 54 C VdWContact
Arg 62 127 Helix GLU 73 C HBDonor
Arg 62 127 Helix GLU 73 C Cationic
Arg 62 127 Helix GLU 73 C VdWContact
Arg 62 127 Helix ILE 53 C Hydrophobic
Met 63 128 Helix PHE 54 C Hydrophobic
Met 63 128 Helix TYR 100 C Hydrophobic
Val 66 131 Helix ILE 53 C Hydrophobic
Val 66 131 Helix ILE 53 C VdWContact
Leu 67 132 Helix TYR 99 C Hydrophobic
Leu 67 132 Helix TYR 100 C Hydrophobic

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