Interactions

2VXW | CCL5_HUMAN — CCL5

Residue contacts: 54
SUMMARY
Protein
CCL5_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P13501 View on UniProt
PDB ID
2VXW View on PDB
Method
X-ray
Resolution
1.7 Å
Date
July 29, 2008
Reference
10.1002/PROT.22542 Open DOI
State
Oligomer
Chain information
Chemokine chain
A
Partner chain
B,C,D
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Ala - NTc.Cm10 N-term CYS 50 C VdWContact
Ala - NTc.Cm10 N-term PHE 28 C Hydrophobic
Ala - NTc.Cm10 N-term GLN 48 C Hydrophobic
Ala - NTc.Cm10 N-term GLN 48 C VdWContact
Ala - NTc.Cm10 N-term THR 30 C Hydrophobic
Ala - NTc.Cm10 N-term VAL 40 C Hydrophobic
Ser 1 NTc.Cm9 N-term CYS 50 C HBAcceptor
Ser 1 NTc.Cm9 N-term CYS 50 C VdWContact
Ser 1 NTc.Cm9 N-term ARG 47 C HBAcceptor
Ser 1 NTc.Cm9 N-term ARG 47 C VdWContact
Ser 1 NTc.Cm9 N-term GLN 48 C HBDonor
Ser 1 NTc.Cm9 N-term GLN 48 C VdWContact
Ser 1 NTc.Cm9 N-term VAL 49 C VdWContact
Pro 2 NTc.Cm8 N-term ALA 13 B Hydrophobic
Pro 2 NTc.Cm8 N-term ILE 15 C Hydrophobic
Ser 5 NTc.Cm5 N-term CYS 50 B HBAcceptor
Ser 5 NTc.Cm5 N-term CYS 50 B VdWContact
Asp 6 NTc.Cm4 N-term GLN 48 B VdWContact
Thr 7 NTc.Cm3 N-term GLN 48 B HBDonor
Thr 7 NTc.Cm3 N-term GLN 48 B VdWContact
Thr 8 NTc.Cm2 N-term CYS 10 B HBAcceptor
Thr 8 NTc.Cm2 N-term CYS 10 B HBDonor
Thr 8 NTc.Cm2 N-term CYS 10 B VdWContact
Thr 8 NTc.Cm2 N-term PHE 12 B VdWContact
Cys 10 CX.1 CX CYS 10 B Hydrophobic
Cys 10 CX.1 CX SER 8 B HBAcceptor
Cys 10 CX.1 CX SER 8 B HBDonor
Cys 10 CX.1 CX SER 8 B VdWContact
Phe 12 cxb1.1 N-loop LYS 33 B Hydrophobic
Phe 12 cxb1.1 N-loop ALA 16 D HBAcceptor
Phe 12 cxb1.1 N-loop ALA 16 D VdWContact
Ala 13 cxb1.2 N-loop ALA 13 D Hydrophobic
Ala 13 cxb1.2 N-loop TYR 14 D VdWContact
Ala 13 cxb1.2 N-loop PRO 2 B Hydrophobic
Ala 13 cxb1.2 N-loop PRO 2 B VdWContact
Tyr 14 cxb1.5 N-loop ALA 13 D VdWContact
Tyr 14 cxb1.5 N-loop ALA 16 D Hydrophobic
Tyr 14 cxb1.5 N-loop TYR 14 D HBAcceptor
Tyr 14 cxb1.5 N-loop TYR 14 D HBDonor
Tyr 14 cxb1.5 N-loop TYR 14 D VdWContact
Ala 16 cxb1.7 N-loop TYR 14 D Hydrophobic
Ala 16 cxb1.7 N-loop PHE 12 D HBDonor
Ala 16 cxb1.7 N-loop PHE 12 D VdWContact
Ala 16 cxb1.7 N-loop ASN 36 D Hydrophobic
Arg 17 cxb1.8 N-loop ASN 36 D VdWContact
Lys 33 b1b2.10 30s-loop PHE 12 B Hydrophobic
Asn 36 b1b2.14 30s-loop ARG 17 D VdWContact
Asn 36 b1b2.14 30s-loop ALA 16 D Hydrophobic
Gln 48 B3.1 B3 GLN 6 B VdWContact
Gln 48 B3.1 B3 SER 7 B HBAcceptor
Gln 48 B3.1 B3 SER 7 B VdWContact
Cys 50 B3.3 B3 SER 5 B HBDonor
Cys 50 B3.3 B3 SER 5 B VdWContact
Lys 55 b3h.4 50s-loop GLU 54 D Cationic
CHEMOKINE DIAGRAM
T S G K C S N P 30s-loop R K N R 40s-loop N P E K 50s-loopC-term F S P L S S Q S S A C C F A Y I A R P L P R A N-term Y F Y E K I H A V V F V T A C V Q K W V R E Y I N S L E M S
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical