Interactions for 5WB2 — Binding Partner: US28


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

Q A S C G K R A 30s-loop R Q H R 40s-loop D P K E 50s-loopC-term L L P H A N Y C A I T C S K M T S K I P V A L N-term N Q Q Y H I L I I L E T A C F L Q W V K D A M Q H L D R Q A A A L T
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Met 1 32 N-term PHE 111 A VdWContact
Met 1 32 N-term TYR 40 A Hydrophobic
Met 1 32 N-term TYR 40 A VdWContact
Ala 2 33 N-term PHE 281 A Hydrophobic
Ala 2 33 N-term PHE 281 A VdWContact
Ala 2 33 N-term LEU 192 A Hydrophobic
Ala 2 33 N-term MET 115 A Hydrophobic
Ala 2 33 N-term GLU 277 A Hydrophobic
Ala 2 33 N-term GLU 277 A HBDonor
Ala 2 33 N-term GLU 277 A VdWContact
Ala 2 33 N-term PHE 111 A Hydrophobic
Ala 2 33 N-term PHE 111 A VdWContact
Ala 2 33 N-term TYR 244 A Hydrophobic
Ala 2 33 N-term TYR 244 A VdWContact
Pro 3 34 N-term TYR 112 A VdWContact
Pro 3 34 N-term LEU 192 A Hydrophobic
Pro 3 34 N-term TYR 244 A HBAcceptor
Pro 3 34 N-term TYR 244 A VdWContact
Gly 4 59 N-term LEU 273 A Hydrophobic
Gly 4 59 N-term LEU 273 A VdWContact
Gly 4 59 N-term LEU 248 A Hydrophobic
Gly 4 59 N-term LEU 255 A Hydrophobic
Gly 4 59 N-term LEU 255 A VdWContact
Gly 4 59 N-term ASN 189 A HBAcceptor
Gly 4 59 N-term ASN 189 A VdWContact
Val 5 60 N-term LEU 273 A Hydrophobic
Val 5 60 N-term GLU 277 A Hydrophobic
Val 5 60 N-term GLU 277 A VdWContact
Thr 6 61 N-term MET 174 A VdWContact
Thr 6 61 N-term LYS 270 A HBAcceptor
Thr 6 61 N-term LYS 270 A VdWContact
Lys 7 62 N-term THR 36 A HBDonor
Lys 7 62 N-term THR 36 A VdWContact
Lys 7 62 N-term LEU 93 A Hydrophobic
Lys 7 62 N-term LEU 29 A Hydrophobic
Lys 7 62 N-term LEU 29 A VdWContact
Lys 7 62 N-term LYS 33 A Hydrophobic
Lys 7 62 N-term LYS 33 A VdWContact
Lys 7 62 N-term ILE 274 A Hydrophobic
Cys 8 63 CX LYS 270 A Anionic
Cys 8 63 CX LYS 270 A VdWContact
Cys 8 63 CX PHE 25 A VdWContact
Asn 9 64 CX PHE 25 A HBAcceptor
Asn 9 64 CX PHE 25 A VdWContact
Ile 10 65 CX PRO 22 A Hydrophobic
Ile 10 65 CX VAL 24 A Hydrophobic
Thr 11 66 CX CYS 23 A HBAcceptor
Thr 11 66 CX CYS 23 A HBDonor
Thr 11 66 CX CYS 23 A VdWContact
Thr 11 66 CX PHE 25 A Hydrophobic
Thr 11 66 CX PHE 25 A VdWContact
Ser 13 68 N-loop ALA 20 A VdWContact
Asn 30 89 B1 ASP 170 A VdWContact
Gln 31 90 30s-loop ASP 170 A VdWContact
Ser 33 94 30s-loop MET 174 A VdWContact
Cys 34 95 30s-loop MET 174 A Hydrophobic
Cys 34 95 30s-loop MET 174 A VdWContact
Cys 34 95 30s-loop TYR 177 A VdWContact
Cys 34 95 30s-loop LYS 270 A Anionic
Cys 34 95 30s-loop LYS 270 A VdWContact
Lys 36 97 30s-loop ASP 178 A VdWContact
Arg 37 99 30s-loop ASP 178 A HBDonor
Arg 37 99 30s-loop ASP 178 A VdWContact
Gln 45 112 40s-loop ASP 17 A HBDonor
Gln 45 112 40s-loop ASP 17 A VdWContact
Arg 47 114 40s-loop ASP 17 A Cationic
Arg 47 114 40s-loop ASP 17 A VdWContact
Arg 47 114 40s-loop GLU 18 A Cationic
Leu 48 115 B3 THR 21 A VdWContact
Leu 48 115 B3 PRO 22 A Hydrophobic
Phe 49 116 B3 THR 21 A Hydrophobic
Phe 49 116 B3 ASP 19 A VdWContact
Phe 49 116 B3 GLU 18 A VdWContact

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