Interactions for 5YAM — Binding Partner: CCL5


Structure details

  • Chemokine Chain: A
  • Partner Chain: B
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Chemokine diagram

S S K C S N L A 30s-loop R R N R 40s-loop N P E K 50s-loopC-term M S P Y G S D T T P C C F A Y L S L A L P R A H N-term T Y F Y E K V V V F V T A C V Q K W V Q E Y I N Y L E M S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Tyr 4 56 N-term LEU 16 B Hydrophobic
Tyr 4 56 N-term LEU 16 B VdWContact
Ser 6 58 N-term CYS 51 B HBAcceptor
Ser 6 58 N-term CYS 51 B VdWContact
Ser 6 58 N-term ALA 14 B VdWContact
Asp 7 59 N-term CYS 51 B VdWContact
Asp 7 59 N-term CYS 12 B VdWContact
Asp 7 59 N-term GLN 49 B VdWContact
Thr 8 60 N-term VAL 41 B Hydrophobic
Thr 8 60 N-term CYS 51 B VdWContact
Thr 8 60 N-term PRO 10 B Hydrophobic
Thr 8 60 N-term GLN 49 B HBDonor
Thr 8 60 N-term GLN 49 B VdWContact
Thr 9 61 N-term CYS 11 B HBAcceptor
Thr 9 61 N-term CYS 11 B HBDonor
Thr 9 61 N-term CYS 11 B VdWContact
Thr 9 61 N-term PRO 10 B VdWContact
Pro 10 62 N-term THR 8 B Hydrophobic
Cys 11 63 CX THR 9 B HBAcceptor
Cys 11 63 CX THR 9 B HBDonor
Cys 11 63 CX THR 9 B VdWContact
Cys 12 67 CX ASP 7 B HBDonor
Cys 12 67 CX ASP 7 B VdWContact
Ala 14 69 N-loop SER 6 B VdWContact
Leu 16 71 N-loop TYR 4 B Hydrophobic
Val 41 102 B2 THR 8 B Hydrophobic
Arg 48 114 40s-loop MET 1 B VdWContact
Arg 48 114 40s-loop SER 2 B VdWContact
Gln 49 115 B3 ASP 7 B VdWContact
Gln 49 115 B3 THR 8 B HBAcceptor
Gln 49 115 B3 THR 8 B VdWContact
Val 50 116 B3 ASP 7 B VdWContact
Cys 51 117 B3 SER 6 B HBDonor
Cys 51 117 B3 SER 6 B VdWContact
Cys 51 117 B3 ASP 7 B VdWContact
Cys 51 117 B3 THR 8 B VdWContact

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