Interactions for 5YAM — Binding Partner: CCL5


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

S S K C S N L A 30s-loop R R N R 40s-loop N P E K 50s-loopC-term M S P Y G S D T T P C C F A Y L S L A L P R A H N-term T Y F Y E K V V V F V T A C V Q K W V Q E Y I N Y L E M S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Met 1 31 N-term ARG 48 A VdWContact
Ser 2 54 N-term ARG 48 A VdWContact
Tyr 4 56 N-term LEU 16 A Hydrophobic
Ser 6 58 N-term ALA 14 A VdWContact
Ser 6 58 N-term CYS 51 A HBAcceptor
Ser 6 58 N-term CYS 51 A VdWContact
Asp 7 59 N-term GLN 49 A VdWContact
Asp 7 59 N-term VAL 50 A VdWContact
Asp 7 59 N-term CYS 51 A VdWContact
Asp 7 59 N-term CYS 12 A HBAcceptor
Asp 7 59 N-term CYS 12 A VdWContact
Thr 8 60 N-term PRO 10 A Hydrophobic
Thr 8 60 N-term GLN 49 A HBDonor
Thr 8 60 N-term GLN 49 A VdWContact
Thr 8 60 N-term VAL 41 A Hydrophobic
Thr 8 60 N-term CYS 51 A VdWContact
Thr 9 61 N-term CYS 11 A HBAcceptor
Thr 9 61 N-term CYS 11 A HBDonor
Thr 9 61 N-term CYS 11 A VdWContact
Pro 10 62 N-term THR 9 A VdWContact
Pro 10 62 N-term THR 8 A Hydrophobic
Cys 11 63 CX THR 9 A HBAcceptor
Cys 11 63 CX THR 9 A HBDonor
Cys 11 63 CX THR 9 A VdWContact
Cys 12 67 CX ASP 7 A VdWContact
Ala 14 69 N-loop SER 6 A VdWContact
Leu 16 71 N-loop TYR 4 A Hydrophobic
Leu 16 71 N-loop TYR 4 A VdWContact
Val 41 102 B2 THR 8 A Hydrophobic
Gln 49 115 B3 THR 8 A HBAcceptor
Gln 49 115 B3 THR 8 A VdWContact
Gln 49 115 B3 ASP 7 A VdWContact
Cys 51 117 B3 SER 6 A HBDonor
Cys 51 117 B3 SER 6 A VdWContact
Cys 51 117 B3 THR 8 A VdWContact
Cys 51 117 B3 ASP 7 A VdWContact

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