Interactions for 6LFM — Binding Partner: CXCL8


Structure details

  • Chemokine Chain: D
  • Partner Chain: E
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Chemokine diagram

E S G P H C A N T E 30s-loop S D G R 40s-loop D P K E 50s-loopC-term A K E L R C Q C I K T Y S K P F H P K F N-term I V R L E K I I I V K L L C L E N W V Q R V V E K F L K R A E N S
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 23 84 B1 GLU 29 E VdWContact
Lys 23 84 B1 GLY 31 E VdWContact
Lys 23 84 B1 SER 30 E HBDonor
Lys 23 84 B1 SER 30 E VdWContact
Glu 24 85 B1 VAL 27 E VdWContact
Glu 24 85 B1 ARG 26 E Anionic
Leu 25 86 B1 VAL 27 E Hydrophobic
Leu 25 86 B1 VAL 27 E HBAcceptor
Leu 25 86 B1 VAL 27 E HBDonor
Leu 25 86 B1 VAL 27 E VdWContact
Leu 25 86 B1 ARG 26 E VdWContact
Arg 26 87 B1 ARG 26 E Hydrophobic
Arg 26 87 B1 ARG 26 E VdWContact
Arg 26 87 B1 LEU 25 E VdWContact
Val 27 88 B1 PHE 65 E Hydrophobic
Val 27 88 B1 GLU 24 E VdWContact
Val 27 88 B1 LEU 25 E Hydrophobic
Val 27 88 B1 LEU 25 E HBAcceptor
Val 27 88 B1 LEU 25 E HBDonor
Val 27 88 B1 LEU 25 E VdWContact
Ile 28 89 B1 GLU 24 E Hydrophobic
Glu 29 90 30s-loop PHE 65 E Hydrophobic
Glu 29 90 30s-loop LYS 23 E HBAcceptor
Glu 29 90 30s-loop LYS 23 E HBDonor
Glu 29 90 30s-loop LYS 23 E Anionic
Glu 29 90 30s-loop LYS 23 E VdWContact
Thr 37 99 30s-loop ALA 69 E Hydrophobic
Phe 65 132 Helix GLU 29 E Hydrophobic
Phe 65 132 Helix VAL 27 E Hydrophobic
Leu 66 133 Helix VAL 27 E Hydrophobic
Leu 66 133 Helix VAL 27 E VdWContact
Leu 66 133 Helix LEU 66 E Hydrophobic
Ala 69 136 C-term GLU 29 E Hydrophobic
Ala 69 136 C-term GLU 29 E VdWContact
Glu 70 137 C-term GLN 59 E VdWContact
Ser 72 139 C-term THR 37 E HBAcceptor
Ser 72 139 C-term THR 37 E VdWContact

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