Interactions for 2L9H — Binding Partner: CCL5
Structure details
- PDB ID: 2L9H open_in_new
- Protein: CCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P13501 open_in_new
- Method: Nmr
- Resolution:
- Date: June 22, 2011
- Reference: 10.1016/J.STR.2011.06.001 open_in_new
- State: Dimer
- Chemokine Chain: D
- Partner Chain: C
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Ser 4 | NTc.Cm6 | N-term | GLN 48 | C | HBAcceptor |
| Ser 4 | NTc.Cm6 | N-term | GLN 48 | C | VdWContact |
| Ser 4 | NTc.Cm6 | N-term | ARG 47 | C | VdWContact |
| Ser 5 | NTc.Cm5 | N-term | GLN 48 | C | HBDonor |
| Ser 5 | NTc.Cm5 | N-term | GLN 48 | C | VdWContact |
| Asp 6 | NTc.Cm4 | N-term | GLN 48 | C | HBDonor |
| Asp 6 | NTc.Cm4 | N-term | GLN 48 | C | VdWContact |
| Asp 6 | NTc.Cm4 | N-term | CYS 50 | C | Hydrophobic |
| Asp 6 | NTc.Cm4 | N-term | CYS 50 | C | VdWContact |
| Thr 7 | NTc.Cm3 | N-term | VAL 40 | C | Hydrophobic |
| Thr 7 | NTc.Cm3 | N-term | PRO 9 | C | Hydrophobic |
| Thr 8 | NTc.Cm2 | N-term | CYS 10 | C | HBAcceptor |
| Thr 8 | NTc.Cm2 | N-term | CYS 10 | C | HBDonor |
| Thr 8 | NTc.Cm2 | N-term | CYS 10 | C | VdWContact |
| Thr 8 | NTc.Cm2 | N-term | PHE 12 | C | Hydrophobic |
| Thr 8 | NTc.Cm2 | N-term | PHE 12 | C | VdWContact |
| Pro 9 | NTc.Cm1 | N-term | THR 7 | C | Hydrophobic |
| Pro 9 | NTc.Cm1 | N-term | THR 7 | C | VdWContact |
| Cys 10 | CX.1 | CX | CYS 10 | C | VdWContact |
| Cys 10 | CX.1 | CX | THR 8 | C | HBAcceptor |
| Cys 10 | CX.1 | CX | THR 8 | C | HBDonor |
| Cys 10 | CX.1 | CX | THR 8 | C | VdWContact |
| Cys 11 | CX.5 | CX | THR 7 | C | VdWContact |
| Phe 12 | cxb1.1 | N-loop | TYR 3 | C | Hydrophobic |
| Phe 12 | cxb1.1 | N-loop | TYR 3 | C | VdWContact |
| Phe 12 | cxb1.1 | N-loop | LYS 33 | C | Hydrophobic |
| Phe 12 | cxb1.1 | N-loop | LYS 33 | C | VdWContact |
| Phe 12 | cxb1.1 | N-loop | THR 8 | C | Hydrophobic |
| Ala 13 | cxb1.2 | N-loop | SER 4 | C | VdWContact |
| Ala 13 | cxb1.2 | N-loop | TYR 3 | C | Hydrophobic |
| Lys 33 | b1b2.10 | 30s-loop | PHE 12 | C | Hydrophobic |
| Lys 33 | b1b2.10 | 30s-loop | PHE 12 | C | VdWContact |
| Val 40 | B2.3 | B2 | THR 7 | C | Hydrophobic |
| Arg 47 | b2b3.12 | 40s-loop | ASP 6 | C | HBDonor |
| Arg 47 | b2b3.12 | 40s-loop | ASP 6 | C | Cationic |
| Arg 47 | b2b3.12 | 40s-loop | ASP 6 | C | VdWContact |
| Gln 48 | B3.1 | B3 | THR 7 | C | Hydrophobic |
| Gln 48 | B3.1 | B3 | THR 7 | C | HBAcceptor |
| Gln 48 | B3.1 | B3 | THR 7 | C | VdWContact |
| Gln 48 | B3.1 | B3 | ASP 6 | C | VdWContact |
| Cys 50 | B3.3 | B3 | SER 5 | C | HBDonor |
| Cys 50 | B3.3 | B3 | SER 5 | C | VdWContact |
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