Interactions for 6WWZ — Binding Partner: CCR6
Structure details
- PDB ID: 6WWZ open_in_new
- Protein: CCL20_HUMAN
- Organism: Homo sapiens
- UniProt ID: P78556 open_in_new
- Method: Cryo-em
- Resolution: 3.34 Å
- Date: June 24, 2020
- Reference: 10.1038/S41467-020-16820-6 open_in_new
- State: Monomer
- Chemokine Chain: C
- Partner Chain: R
Chemokine diagram
Pick color:
Interactions for this Binding Partner
Download list in excel
Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Ala 1 | 58 | N-term | GLU 198 | R | VdWContact |
Asn 3 | 60 | N-term | VAL 41 | R | Hydrophobic |
Asn 3 | 60 | N-term | LEU 38 | R | Hydrophobic |
Asn 3 | 60 | N-term | ARG 42 | R | Hydrophobic |
Asn 3 | 60 | N-term | ARG 42 | R | HBAcceptor |
Phe 4 | 61 | N-term | THR 191 | R | Hydrophobic |
Phe 4 | 61 | N-term | GLN 192 | R | Hydrophobic |
Phe 4 | 61 | N-term | VAL 196 | R | Hydrophobic |
Asp 5 | 62 | N-term | LEU 35 | R | Hydrophobic |
Asp 5 | 62 | N-term | LEU 35 | R | VdWContact |
Asp 5 | 62 | N-term | GLN 192 | R | VdWContact |
Asp 5 | 62 | N-term | CYS 36 | R | VdWContact |
Leu 8 | 68 | N-loop | CYS 288 | R | Hydrophobic |
Leu 8 | 68 | N-loop | ARG 286 | R | Hydrophobic |
Tyr 10 | 70 | N-loop | MET 284 | R | Hydrophobic |
Tyr 10 | 70 | N-loop | MET 284 | R | VdWContact |
Phe 19 | 82 | N-loop | TYR 27 | R | Hydrophobic |
Asn 29 | 92 | 30s-loop | TYR 201 | R | VdWContact |
Glu 30 | 93 | 30s-loop | LYS 200 | R | Hydrophobic |
Glu 30 | 93 | 30s-loop | LYS 200 | R | HBAcceptor |
Glu 30 | 93 | 30s-loop | LYS 200 | R | Anionic |
Glu 30 | 93 | 30s-loop | LYS 200 | R | VdWContact |
Glu 30 | 93 | 30s-loop | TYR 189 | R | Hydrophobic |
Glu 30 | 93 | 30s-loop | TYR 189 | R | VdWContact |
Cys 32 | 95 | 30s-loop | LYS 211 | R | VdWContact |
Asp 33 | 96 | 30s-loop | ARG 286 | R | Anionic |
Asp 33 | 96 | 30s-loop | ARG 286 | R | VdWContact |
Ser 46 | 115 | B3 | LEU 35 | R | HBAcceptor |
Ser 46 | 115 | B3 | LEU 35 | R | VdWContact |