Interactions for 2N54 — Binding Partner: XCL1
Structure details
- PDB ID: 2N54 open_in_new
- Protein: XCL1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P47992 open_in_new
- Method: Nmr
- Resolution:
- Date: Oct. 7, 2015
- Reference: 10.1021/ACSCHEMBIO.5B00542 open_in_new
- State: Dimer
- Chemokine Chain: A
- Partner Chain: B
Chemokine diagram
Interactions for this Binding Partner
Download list as CSV
| Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
|---|---|---|---|---|---|
| Val 12 | cxb1.1 | N-loop | LEU 214 | B | Hydrophobic |
| Val 12 | cxb1.1 | N-loop | LEU 214 | B | VdWContact |
| Val 12 | cxb1.1 | N-loop | THR 216 | B | Hydrophobic |
| Leu 14 | cxb1.5 | N-loop | VAL 212 | B | Hydrophobic |
| Leu 14 | cxb1.5 | N-loop | VAL 212 | B | VdWContact |
| Leu 14 | cxb1.5 | N-loop | LEU 214 | B | Hydrophobic |
| Leu 14 | cxb1.5 | N-loop | LEU 214 | B | VdWContact |
| Thr 16 | cxb1.7 | N-loop | VAL 212 | B | Hydrophobic |
| Gln 17 | cxb1.8 | N-loop | THR 210 | B | HBDonor |
| Gln 17 | cxb1.8 | N-loop | THR 210 | B | VdWContact |
| Gln 17 | cxb1.8 | N-loop | CYS 249 | B | VdWContact |
| Gln 17 | cxb1.8 | N-loop | PRO 251 | B | VdWContact |
| Leu 19 | cxb1.11 | N-loop | PRO 251 | B | Hydrophobic |
| Ser 22 | cxb1.16 | N-loop | GLU 231 | B | HBDonor |
| Ser 22 | cxb1.16 | N-loop | GLU 231 | B | VdWContact |
| Arg 23 | B1.1 | B1 | GLU 231 | B | HBDonor |
| Arg 23 | B1.1 | B1 | GLU 231 | B | VdWContact |
| Lys 25 | B1.3 | B1 | GLU 231 | B | Hydrophobic |
| Lys 25 | B1.3 | B1 | GLU 231 | B | Cationic |
| Lys 25 | B1.3 | B1 | GLU 231 | B | VdWContact |
| Tyr 27 | B1.5 | B1 | ILE 229 | B | Hydrophobic |
| Tyr 27 | B1.5 | B1 | ILE 229 | B | VdWContact |
| Ile 29 | B1.7 | B1 | ILE 238 | B | Hydrophobic |
| Ile 29 | B1.7 | B1 | ILE 240 | B | Hydrophobic |
| Ile 29 | B1.7 | B1 | ILE 240 | B | VdWContact |
| Ile 29 | B1.7 | B1 | TYR 227 | B | Hydrophobic |
| Glu 31 | b1b2.6 | 30s-loop | SER 222 | B | HBAcceptor |
| Glu 31 | b1b2.6 | 30s-loop | SER 222 | B | VdWContact |
| Glu 31 | b1b2.6 | 30s-loop | VAL 221 | B | VdWContact |
| Glu 31 | b1b2.6 | 30s-loop | ILE 240 | B | Hydrophobic |
| Glu 31 | b1b2.6 | 30s-loop | LYS 225 | B | Hydrophobic |
| Glu 31 | b1b2.6 | 30s-loop | LYS 225 | B | Anionic |
| Glu 31 | b1b2.6 | 30s-loop | LYS 225 | B | VdWContact |
| Glu 31 | b1b2.6 | 30s-loop | ARG 223 | B | HBAcceptor |
| Glu 31 | b1b2.6 | 30s-loop | ARG 223 | B | VdWContact |
| Ile 38 | B2.3 | B2 | ILE 238 | B | Hydrophobic |
| Ile 38 | B2.3 | B2 | ILE 238 | B | VdWContact |
| Ile 40 | B2.5 | B2 | ILE 229 | B | Hydrophobic |
| Ile 40 | B2.5 | B2 | ILE 229 | B | VdWContact |
| Ile 40 | B2.5 | B2 | GLU 231 | B | Hydrophobic |
| Leu 45 | b2b3.12 | 40s-loop | CYS 249 | B | Hydrophobic |
| Leu 45 | b2b3.12 | 40s-loop | CYS 249 | B | VdWContact |
| Leu 45 | b2b3.12 | 40s-loop | VAL 247 | B | Hydrophobic |
| Leu 45 | b2b3.12 | 40s-loop | VAL 247 | B | VdWContact |
| Val 47 | B3.2 | B3 | LEU 245 | B | Hydrophobic |
| Val 47 | B3.2 | B3 | LEU 245 | B | VdWContact |
| Val 47 | B3.2 | B3 | LEU 214 | B | Hydrophobic |
| Ala 49 | B3.4 | B3 | LEU 245 | B | VdWContact |
| Pro 51 | b3h.2 | 50s-loop | GLN 217 | B | VdWContact |
| Pro 51 | b3h.2 | 50s-loop | LEU 219 | B | Hydrophobic |
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