Interactions

3ONA | CX3CL1_HUMAN — Tumour necrosis factor receptor

Residue contacts: 36
SUMMARY
Protein
CX3CL1_HUMAN View protein entry
Organism
Homo sapiens
UniProt ID
P78423 View on UniProt
PDB ID
3ONA View on PDB
Method
X-ray
Resolution
2.6 Å
Date
Aug. 17, 2011
Reference
10.1371/JOURNAL.PPAT.1002162 Open DOI
State
Monomer
Chain information
Chemokine chain
B
Partner chain
A
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Thr 16 CX.3 CX ASN 315 A HBAcceptor
Thr 16 CX.3 CX ASN 315 A VdWContact
Ser 17 CX.4 CX ASN 315 A VdWContact
Lys 18 CX.5 CX ASN 315 A HBAcceptor
Lys 18 CX.5 CX ASN 315 A VdWContact
Lys 18 CX.5 CX ASP 316 A HBAcceptor
Lys 18 CX.5 CX ASP 316 A Cationic
Lys 18 CX.5 CX ASP 316 A VdWContact
Ile 19 cxb1.1 N-loop ASN 315 A VdWContact
Ile 19 cxb1.1 N-loop PRO 314 A Hydrophobic
Ile 19 cxb1.1 N-loop PRO 314 A VdWContact
Ile 19 cxb1.1 N-loop PRO 313 A Hydrophobic
Pro 20 cxb1.2 N-loop PRO 314 A VdWContact
Pro 20 cxb1.2 N-loop ASP 316 A Hydrophobic
Pro 20 cxb1.2 N-loop PHE 225 A Hydrophobic
Ala 22 cxb1.6 N-loop ILE 209 A Hydrophobic
Ala 22 cxb1.6 N-loop PHE 225 A Hydrophobic
Ala 22 cxb1.6 N-loop PHE 225 A VdWContact
Leu 23 cxb1.8 N-loop PRO 314 A Hydrophobic
Leu 23 cxb1.8 N-loop TYR 212 A Hydrophobic
Leu 23 cxb1.8 N-loop PHE 225 A Hydrophobic
Thr 43 b1b2.16 30s-loop PRO 314 A Hydrophobic
Arg 44 b1b2.17 30s-loop THR 226 A HBDonor
Arg 44 b1b2.17 30s-loop THR 226 A VdWContact
Arg 44 b1b2.17 30s-loop PHE 225 A VdWContact
Arg 44 b1b2.17 30s-loop ASP 167 A HBDonor
Arg 44 b1b2.17 30s-loop ASP 167 A Cationic
Arg 44 b1b2.17 30s-loop ASP 167 A VdWContact
Arg 47 B2.3 B2 GLU 169 A HBDonor
Arg 47 B2.3 B2 GLU 169 A Cationic
Arg 47 B2.3 B2 GLU 169 A VdWContact
Arg 47 B2.3 B2 ASP 310 A Cationic
Arg 47 B2.3 B2 ASP 310 A VdWContact
Phe 49 B2.5 B2 PRO 313 A Hydrophobic
Phe 49 B2.5 B2 PRO 313 A VdWContact
Phe 49 B2.5 B2 HIS 311 A VdWContact
CHEMOKINE DIAGRAM
K R A I I L E T R 30s-loop A D P 40s-loop V K D A 50s-loopC-term C N I T C S K M T S K I P V A L L I H Y Q N-term G C S A Q N Q Q H R L F C W Q E K M Q H L D R Q A A A L T
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical