Interactions for 1A15 — Binding Partner: CXCL12


Structure details

  • Chemokine Chain: B
  • Partner Chain: A
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Chemokine diagram

N T P A C A L Q 30s-loop K N N N R 40s-loop D P K L 50s-loopC-term R C P C R F F E S H V A R A N N-term L I K L H K V I V A R L I C V Q K W I Q E Y L E K
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Interactions for this Binding Partner

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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
His 25 85 B1 LEU 29 A Hydrophobic
His 25 85 B1 LYS 27 A Hydrophobic
Leu 26 86 B1 ILE 28 A Hydrophobic
Leu 26 86 B1 ILE 28 A HBAcceptor
Leu 26 86 B1 ILE 28 A HBDonor
Leu 26 86 B1 ILE 28 A VdWContact
Leu 26 86 B1 LYS 27 A VdWContact
Lys 27 87 B1 LEU 26 A VdWContact
Lys 27 87 B1 HIS 25 A Hydrophobic
Ile 28 88 B1 ALA 65 A Hydrophobic
Ile 28 88 B1 LEU 26 A Hydrophobic
Ile 28 88 B1 LEU 26 A HBAcceptor
Ile 28 88 B1 LEU 26 A HBDonor
Ile 28 88 B1 LEU 26 A VdWContact
Ile 28 88 B1 TYR 61 A Hydrophobic
Ile 28 88 B1 TYR 61 A HBAcceptor
Ile 28 88 B1 TYR 61 A VdWContact
Ile 28 88 B1 ILE 28 A Hydrophobic
Ile 28 88 B1 LEU 62 A Hydrophobic
Ile 28 88 B1 LEU 62 A VdWContact
Ile 28 88 B1 HIS 25 A VdWContact
Leu 29 89 B1 HIS 25 A Hydrophobic
Leu 29 89 B1 HIS 25 A VdWContact
Asn 30 90 30s-loop TYR 61 A Hydrophobic
Asn 30 90 30s-loop TYR 61 A VdWContact
Asn 30 90 30s-loop LYS 24 A HBDonor
Asn 30 90 30s-loop LYS 24 A VdWContact
Asn 30 90 30s-loop ARG 20 A VdWContact
Asn 30 90 30s-loop VAL 23 A HBDonor
Asn 30 90 30s-loop VAL 23 A VdWContact
Gln 37 100 30s-loop ALA 65 A Hydrophobic
Ile 38 101 B2 ALA 65 A Hydrophobic
Pro 53 120 50s-loop LEU 66 A Hydrophobic
Pro 53 120 50s-loop LEU 66 A VdWContact
Pro 53 120 50s-loop ASN 67 A VdWContact
Lys 54 121 50s-loop LEU 66 A HBDonor
Lys 54 121 50s-loop LEU 66 A VdWContact
Tyr 61 128 Helix ILE 28 A Hydrophobic
Tyr 61 128 Helix ILE 28 A HBDonor
Tyr 61 128 Helix ILE 28 A VdWContact
Tyr 61 128 Helix ASN 30 A Hydrophobic
Tyr 61 128 Helix ASN 30 A HBAcceptor
Tyr 61 128 Helix ASN 30 A VdWContact
Tyr 61 128 Helix LEU 29 A VdWContact
Tyr 61 128 Helix LEU 36 A VdWContact
Leu 62 129 Helix ASN 67 A VdWContact
Leu 62 129 Helix ILE 28 A Hydrophobic
Leu 62 129 Helix ILE 28 A VdWContact
Leu 62 129 Helix LEU 62 A Hydrophobic
Glu 63 130 Helix LEU 36 A VdWContact
Glu 63 130 Helix ASN 30 A VdWContact

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