Interactions for 8XWA — Binding Partner: CXCL1
Structure details
- PDB ID: 8XWA open_in_new
- Protein: CXCL1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P09341 open_in_new
- Method: Cryo-em
- Resolution: 3.48 Å
- Date: Jan. 15, 2025
- Reference: open_in_new
- State: Dimer
- Chemokine Chain: E
- Partner Chain: D
Chemokine diagram
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Interactions for this Binding Partner
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Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Gln 24 | 84 | B1 | SER 30 | D | HBAcceptor |
Gln 24 | 84 | B1 | SER 30 | D | VdWContact |
Val 26 | 86 | B1 | VAL 28 | D | HBAcceptor |
Val 26 | 86 | B1 | VAL 28 | D | HBDonor |
Val 26 | 86 | B1 | VAL 28 | D | VdWContact |
Val 28 | 88 | B1 | VAL 26 | D | HBAcceptor |
Val 28 | 88 | B1 | VAL 26 | D | HBDonor |
Val 28 | 88 | B1 | VAL 26 | D | VdWContact |
Val 28 | 88 | B1 | SER 25 | D | VdWContact |
Val 28 | 88 | B1 | LEU 67 | D | Hydrophobic |
Ser 30 | 90 | 30s-loop | GLN 24 | D | HBDonor |
Ser 30 | 90 | 30s-loop | GLN 24 | D | VdWContact |
Val 40 | 101 | B2 | LEU 67 | D | Hydrophobic |
Lys 60 | 126 | Helix | LEU 67 | D | Hydrophobic |
Ile 63 | 129 | Helix | ILE 63 | D | Hydrophobic |
Ile 63 | 129 | Helix | ILE 63 | D | VdWContact |
Ile 63 | 129 | Helix | LEU 67 | D | Hydrophobic |
Ile 63 | 129 | Helix | LEU 67 | D | VdWContact |
Glu 64 | 130 | Helix | LYS 60 | D | Anionic |
Glu 64 | 130 | Helix | LYS 60 | D | VdWContact |
Met 66 | 132 | Helix | SER 30 | D | VdWContact |
Met 66 | 132 | Helix | THR 38 | D | VdWContact |
Met 66 | 132 | Helix | VAL 28 | D | Hydrophobic |
Leu 67 | 133 | Helix | PRO 54 | D | Hydrophobic |
Leu 67 | 133 | Helix | LYS 60 | D | Hydrophobic |
Leu 67 | 133 | Helix | VAL 40 | D | Hydrophobic |
Leu 67 | 133 | Helix | THR 38 | D | Hydrophobic |
Leu 67 | 133 | Helix | VAL 28 | D | Hydrophobic |
Leu 67 | 133 | Helix | ILE 63 | D | Hydrophobic |
Leu 67 | 133 | Helix | ILE 63 | D | VdWContact |
Asn 68 | 134 | Helix | LYS 60 | D | VdWContact |