Interactions for 8XWS — Binding Partner: CXCL5
Structure details
- PDB ID: 8XWS open_in_new
- Protein: CXCL5_HUMAN
- Organism: Homo sapiens
- UniProt ID: P42830 open_in_new
- Method: Cryo-em
- Resolution: 3.06 Å
- Date: Jan. 15, 2025
- Reference: open_in_new
- State: Dimer
- Chemokine Chain: D
- Partner Chain: B
Chemokine diagram
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Interactions for this Binding Partner
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Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Ser 28 | 84 | B1 | ALA 34 | B | HBAcceptor |
Ser 28 | 84 | B1 | ALA 34 | B | VdWContact |
Asn 29 | 85 | B1 | PHE 33 | B | VdWContact |
Asn 29 | 85 | B1 | VAL 32 | B | HBDonor |
Asn 29 | 85 | B1 | VAL 32 | B | VdWContact |
Leu 30 | 86 | B1 | VAL 32 | B | HBAcceptor |
Leu 30 | 86 | B1 | VAL 32 | B | HBDonor |
Leu 30 | 86 | B1 | VAL 32 | B | VdWContact |
Gln 31 | 87 | B1 | GLN 31 | B | Hydrophobic |
Val 32 | 88 | B1 | ILE 70 | B | Hydrophobic |
Val 32 | 88 | B1 | LEU 30 | B | HBAcceptor |
Val 32 | 88 | B1 | LEU 30 | B | HBDonor |
Val 32 | 88 | B1 | LEU 30 | B | VdWContact |
Val 32 | 88 | B1 | LEU 71 | B | Hydrophobic |
Val 32 | 88 | B1 | ASN 29 | B | HBAcceptor |
Val 32 | 88 | B1 | ASN 29 | B | VdWContact |
Phe 33 | 89 | B1 | ASN 29 | B | VdWContact |
Ala 34 | 90 | 30s-loop | ILE 70 | B | Hydrophobic |
Ala 34 | 90 | 30s-loop | ILE 70 | B | VdWContact |
Ala 34 | 90 | 30s-loop | SER 28 | B | HBDonor |
Ala 34 | 90 | 30s-loop | SER 28 | B | VdWContact |
Val 42 | 99 | 30s-loop | ILE 70 | B | VdWContact |
Val 42 | 99 | 30s-loop | LEU 71 | B | Hydrophobic |
Val 42 | 99 | 30s-loop | LEU 71 | B | VdWContact |
Val 44 | 101 | B2 | LEU 71 | B | Hydrophobic |
Leu 63 | 125 | Helix | LEU 71 | B | Hydrophobic |
Leu 63 | 125 | Helix | LEU 71 | B | VdWContact |
Ile 67 | 129 | Helix | ILE 67 | B | Hydrophobic |
Ile 67 | 129 | Helix | LEU 71 | B | Hydrophobic |
Ile 70 | 132 | Helix | ALA 34 | B | Hydrophobic |
Ile 70 | 132 | Helix | ALA 34 | B | VdWContact |
Ile 70 | 132 | Helix | VAL 42 | B | VdWContact |
Ile 70 | 132 | Helix | VAL 32 | B | Hydrophobic |
Leu 71 | 133 | Helix | ILE 67 | B | Hydrophobic |
Leu 71 | 133 | Helix | LEU 63 | B | Hydrophobic |
Leu 71 | 133 | Helix | LEU 63 | B | VdWContact |
Leu 71 | 133 | Helix | VAL 42 | B | Hydrophobic |
Leu 71 | 133 | Helix | VAL 42 | B | VdWContact |
Leu 71 | 133 | Helix | VAL 32 | B | Hydrophobic |
Leu 71 | 133 | Helix | VAL 44 | B | Hydrophobic |