Interactions

4RWS | CXCL2_HHV8P — CXCR4

Residue contacts: 61
SUMMARY
Protein
CXCL2_HHV8P View protein entry
Organism
Human herpesvirus 8 type P (isolate GK18)
UniProt ID
Q98157 View on UniProt
PDB ID
4RWS View on PDB
Method
X-ray
Resolution
3.1 Å
Date
Feb. 11, 2015
Reference
10.1126/SCIENCE.1261064 Open DOI
State
Monomer
Chain information
Chemokine chain
C
Partner chain
A
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INTERACTION TABLE
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Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Leu 1 NTc.Cm10 N-term HIS 113 A Hydrophobic
Leu 1 NTc.Cm10 N-term HIS 113 A VdWContact
Leu 1 NTc.Cm10 N-term VAL 112 A Hydrophobic
Leu 1 NTc.Cm10 N-term ASP 97 A Hydrophobic
Leu 1 NTc.Cm10 N-term ASP 97 A VdWContact
Leu 1 NTc.Cm10 N-term TRP 94 A Hydrophobic
Leu 1 NTc.Cm10 N-term TRP 102 A Hydrophobic
Gly 2 NTc.Cm9 N-term GLU 288 A VdWContact
Ala 3 NTc.Cm8 N-term GLU 288 A HBDonor
Ala 3 NTc.Cm8 N-term GLU 288 A VdWContact
Ala 3 NTc.Cm8 N-term HIS 281 A VdWContact
Ser 4 NTc.Cm7 N-term ASP 97 A HBDonor
Ser 4 NTc.Cm7 N-term ASP 97 A VdWContact
Trp 5 NTc.Cm6 N-term CYS 187 A Hydrophobic
Trp 5 NTc.Cm6 N-term CYS 187 A VdWContact
His 6 NTc.Cm5 N-term ASP 262 A HBDonor
His 6 NTc.Cm5 N-term ASP 262 A VdWContact
His 6 NTc.Cm5 N-term ILE 284 A Hydrophobic
His 6 NTc.Cm5 N-term HIS 281 A Hydrophobic
His 6 NTc.Cm5 N-term HIS 281 A HBAcceptor
His 6 NTc.Cm5 N-term HIS 281 A VdWContact
Arg 7 NTc.Cm4 N-term GLU 277 A Cationic
Arg 7 NTc.Cm4 N-term ARG 30 A VdWContact
Arg 7 NTc.Cm4 N-term ASP 262 A HBDonor
Arg 7 NTc.Cm4 N-term ASP 262 A Cationic
Arg 7 NTc.Cm4 N-term ASP 262 A VdWContact
Pro 8 NTc.Cm3 N-term ILE 185 A Hydrophobic
Asp 9 NTc.Cm2 N-term ALA 180 A VdWContact
Asp 9 NTc.Cm2 N-term ARG 30 A HBAcceptor
Asp 9 NTc.Cm2 N-term ARG 30 A VdWContact
Asp 9 NTc.Cm2 N-term ASP 181 A Hydrophobic
Asp 9 NTc.Cm2 N-term ASP 181 A VdWContact
Lys 10 NTc.Cm1 N-term ASP 181 A Cationic
Lys 10 NTc.Cm1 N-term ASP 182 A Cationic
Lys 10 NTc.Cm1 N-term PHE 29 A Hydrophobic
Lys 10 NTc.Cm1 N-term PHE 29 A VdWContact
Lys 10 NTc.Cm1 N-term CYS 28 A VdWContact
Cys 11 CX.1 CX ARG 30 A Anionic
Cys 11 CX.1 CX ARG 30 A VdWContact
Cys 11 CX.1 CX CYS 28 A HBAcceptor
Cys 11 CX.1 CX CYS 28 A VdWContact
Leu 13 cxb1.1 N-loop GLU 277 A VdWContact
Leu 13 cxb1.1 N-loop CYS 274 A Hydrophobic
Leu 13 cxb1.1 N-loop CYS 28 A Hydrophobic
Gly 14 cxb1.2 N-loop LYS 25 A VdWContact
Gln 16 cxb1.6 N-loop MET 24 A VdWContact
Gln 16 cxb1.6 N-loop LYS 25 A Hydrophobic
Gln 16 cxb1.6 N-loop LYS 25 A HBAcceptor
Gln 16 cxb1.6 N-loop LYS 25 A VdWContact
Gln 16 cxb1.6 N-loop SER 23 A HBDonor
Gln 16 cxb1.6 N-loop SER 23 A VdWContact
Leu 20 cxb1.11 N-loop MET 24 A Hydrophobic
Ile 41 B2.3 B2 PRO 27 A Hydrophobic
Gln 49 B3.1 B3 PRO 27 A Hydrophobic
Gln 49 B3.1 B3 PRO 27 A VdWContact
Gln 49 B3.1 B3 PHE 29 A Hydrophobic
Val 50 B3.2 B3 MET 24 A Hydrophobic
Val 50 B3.2 B3 LYS 25 A VdWContact
Cys 51 B3.3 B3 LYS 25 A Hydrophobic
Cys 51 B3.3 B3 LYS 25 A HBDonor
Cys 51 B3.3 B3 LYS 25 A VdWContact
CHEMOKINE DIAGRAM
T S Q L C S K P 30s-loop K R G R 40s-loop D K S K 50s-loopC-term L G A S C H R P D K C C L G Y Q K R P L P Q V N-term P Y W S S L L G V I F L T A C V Q D W V K K L M Q Q L P V T A
INTERACTION PATTERN SEARCH
0.00 = no similarity, 1.00 = identical