Interactions for 8XWV — Binding Partner: CXCR2
Structure details
- PDB ID: 8XWV open_in_new
- Protein: CXCL1_HUMAN
- Organism: Homo sapiens
- UniProt ID: P09341 open_in_new
- Method: Cryo-em
- Resolution: 3.07 Å
- Date: Jan. 22, 2025
- Reference: open_in_new
- State: Dimer
- Chemokine Chain: D
- Partner Chain: R
Chemokine diagram
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Interactions for this Binding Partner
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Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Ser 2 | 56 | N-term | SER 43 | R | HBDonor |
Ser 2 | 56 | N-term | SER 43 | R | VdWContact |
Ser 2 | 56 | N-term | SER 193 | R | HBAcceptor |
Ser 2 | 56 | N-term | SER 193 | R | VdWContact |
Val 3 | 57 | N-term | SER 193 | R | VdWContact |
Val 3 | 57 | N-term | GLY 111 | R | VdWContact |
Ala 4 | 58 | N-term | VAL 192 | R | Hydrophobic |
Ala 4 | 58 | N-term | VAL 192 | R | VdWContact |
Thr 5 | 59 | N-term | TYR 197 | R | VdWContact |
Glu 6 | 60 | N-term | TYR 197 | R | VdWContact |
Glu 6 | 60 | N-term | ARG 212 | R | Anionic |
Glu 6 | 60 | N-term | ARG 278 | R | HBAcceptor |
Glu 6 | 60 | N-term | ARG 278 | R | Anionic |
Glu 6 | 60 | N-term | ARG 278 | R | VdWContact |
Glu 6 | 60 | N-term | ARG 208 | R | HBAcceptor |
Glu 6 | 60 | N-term | ARG 208 | R | Anionic |
Glu 6 | 60 | N-term | ARG 208 | R | VdWContact |
Glu 6 | 60 | N-term | LEU 296 | R | Hydrophobic |
Leu 7 | 61 | N-term | VAL 187 | R | Hydrophobic |
Leu 7 | 61 | N-term | TYR 197 | R | Hydrophobic |
Leu 7 | 61 | N-term | TYR 197 | R | VdWContact |
Leu 7 | 61 | N-term | ARG 278 | R | HBAcceptor |
Leu 7 | 61 | N-term | ARG 278 | R | VdWContact |
Arg 8 | 62 | N-term | ARG 289 | R | VdWContact |
Arg 8 | 62 | N-term | ASP 293 | R | HBDonor |
Arg 8 | 62 | N-term | ASP 293 | R | Cationic |
Arg 8 | 62 | N-term | ASP 293 | R | VdWContact |
Arg 8 | 62 | N-term | ASP 274 | R | HBDonor |
Arg 8 | 62 | N-term | ASP 274 | R | Cationic |
Arg 8 | 62 | N-term | ASP 274 | R | VdWContact |
Gln 10 | 66 | CX | ASN 191 | R | HBAcceptor |
Gln 10 | 66 | CX | ASN 191 | R | VdWContact |
Gln 10 | 66 | CX | PRO 38 | R | VdWContact |
Gln 10 | 66 | CX | CYS 39 | R | HBAcceptor |
Gln 10 | 66 | CX | CYS 39 | R | VdWContact |
Leu 12 | 68 | N-loop | GLU 284 | R | Hydrophobic |
Leu 12 | 68 | N-loop | ARG 289 | R | VdWContact |
Leu 12 | 68 | N-loop | CYS 39 | R | Hydrophobic |
Gln 13 | 69 | N-loop | ALA 36 | R | VdWContact |
Leu 15 | 71 | N-loop | ALA 36 | R | Hydrophobic |
Pro 33 | 93 | 30s-loop | VAL 187 | R | Hydrophobic |
Pro 33 | 93 | 30s-loop | ASP 199 | R | Hydrophobic |
Pro 33 | 93 | 30s-loop | ASP 199 | R | VdWContact |
Pro 33 | 93 | 30s-loop | THR 204 | R | Hydrophobic |
Pro 33 | 93 | 30s-loop | THR 204 | R | VdWContact |
Ala 36 | 96 | 30s-loop | ALA 205 | R | Hydrophobic |
Ile 41 | 102 | B2 | PRO 38 | R | Hydrophobic |
Cys 51 | 117 | B3 | ALA 36 | R | Hydrophobic |