Interactions for 8XXX — Binding Partner: CXCR2
Structure details
- PDB ID: 8XXX open_in_new
- Protein: CXCL6_HUMAN
- Organism: Homo sapiens
- UniProt ID: P80162 open_in_new
- Method: Cryo-em
- Resolution: 3.17 Å
- Date: Jan. 15, 2025
- Reference: open_in_new
- State: Monomer
- Chemokine Chain: D
- Partner Chain: R
Chemokine diagram
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Interactions for this Binding Partner
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Chemokine Residue | Generic Number | Segment | Partner Residue | Partner Chain | Interaction Type |
---|---|---|---|---|---|
Ala 5 | 56 | N-term | SER 193 | R | VdWContact |
Leu 7 | 58 | N-term | VAL 192 | R | Hydrophobic |
Leu 7 | 58 | N-term | VAL 192 | R | VdWContact |
Leu 7 | 58 | N-term | PRO 41 | R | Hydrophobic |
Glu 9 | 60 | N-term | ARG 212 | R | Anionic |
Glu 9 | 60 | N-term | LEU 296 | R | Hydrophobic |
Glu 9 | 60 | N-term | LEU 296 | R | VdWContact |
Glu 9 | 60 | N-term | ARG 278 | R | Anionic |
Glu 9 | 60 | N-term | ARG 278 | R | VdWContact |
Glu 9 | 60 | N-term | ARG 208 | R | HBAcceptor |
Glu 9 | 60 | N-term | ARG 208 | R | Anionic |
Glu 9 | 60 | N-term | ARG 208 | R | VdWContact |
Leu 10 | 61 | N-term | VAL 192 | R | Hydrophobic |
Leu 10 | 61 | N-term | TYR 197 | R | Hydrophobic |
Leu 10 | 61 | N-term | TYR 197 | R | VdWContact |
Leu 10 | 61 | N-term | ARG 278 | R | HBAcceptor |
Leu 10 | 61 | N-term | ARG 278 | R | VdWContact |
Arg 11 | 62 | N-term | ASP 293 | R | HBDonor |
Arg 11 | 62 | N-term | ASP 293 | R | Cationic |
Arg 11 | 62 | N-term | ASP 293 | R | VdWContact |
Arg 11 | 62 | N-term | ARG 289 | R | VdWContact |
Arg 11 | 62 | N-term | ARG 278 | R | VdWContact |
Arg 11 | 62 | N-term | ASP 274 | R | Cationic |
Cys 12 | 63 | CX | ARG 289 | R | HBAcceptor |
Cys 12 | 63 | CX | ARG 289 | R | VdWContact |
Thr 13 | 66 | CX | CYS 39 | R | HBAcceptor |
Thr 13 | 66 | CX | CYS 39 | R | VdWContact |
Leu 15 | 68 | N-loop | CYS 39 | R | Hydrophobic |
Leu 15 | 68 | N-loop | ARG 289 | R | VdWContact |
Leu 15 | 68 | N-loop | GLU 284 | R | Hydrophobic |
Arg 16 | 69 | N-loop | ASP 35 | R | HBDonor |
Arg 16 | 69 | N-loop | ASP 35 | R | Cationic |
Arg 16 | 69 | N-loop | ASP 35 | R | VdWContact |
Ala 34 | 91 | 30s-loop | ASN 202 | R | Hydrophobic |
Ala 34 | 91 | 30s-loop | ASN 202 | R | VdWContact |
Pro 36 | 93 | 30s-loop | VAL 187 | R | Hydrophobic |
Pro 36 | 93 | 30s-loop | THR 204 | R | VdWContact |
Gln 37 | 94 | 30s-loop | SER 189 | R | HBAcceptor |
Gln 37 | 94 | 30s-loop | SER 189 | R | VdWContact |
Ser 39 | 96 | 30s-loop | ASN 202 | R | VdWContact |
Val 44 | 102 | B2 | PRO 38 | R | Hydrophobic |
Gln 52 | 115 | B3 | PRO 38 | R | Hydrophobic |
Gln 52 | 115 | B3 | PRO 38 | R | VdWContact |