Interactions for 1F2L — Binding Partner: CX3CL1


Structure details

  • Chemokine Chain: A
  • Partner Chain: B,C,D
Download Full PDB

3D view

NGL viewer powered by MMTF.


Chemokine diagram

Q A S C G K R A 30s-loop R Q H R 40s-loop D P K E 50s-loopC-term V T K C N I T C S K M T S K I P V A L N-term N Q Q Y H I L I I L E T A C F L Q W V K D A M Q H L D R Q
Pick color:
 
 
 
 
 
 
 
 
 
 
 
 


Interactions for this Binding Partner

Download list in excel
Chemokine Residue Generic Number Segment Partner Residue Partner Chain Interaction Type
Lys 7 62 N-term LYS 14 D Hydrophobic
Lys 7 62 N-term LYS 14 D VdWContact
Cys 8 63 CX SER 13 D VdWContact
Cys 8 63 CX LYS 14 D HBAcceptor
Cys 8 63 CX LYS 14 D VdWContact
Asn 9 64 CX LYS 14 D HBDonor
Asn 9 64 CX LYS 14 D VdWContact
Asn 9 64 CX CYS 12 D VdWContact
Asn 9 64 CX CYS 50 D HBAcceptor
Asn 9 64 CX CYS 50 D HBDonor
Asn 9 64 CX CYS 50 D VdWContact
Asn 9 64 CX SER 13 D HBAcceptor
Asn 9 64 CX SER 13 D VdWContact
Ile 10 65 CX ILE 40 D Hydrophobic
Ile 10 65 CX CYS 50 D VdWContact
Ile 10 65 CX ILE 10 D Hydrophobic
Ile 10 65 CX ILE 10 D VdWContact
Thr 11 66 CX THR 11 D HBAcceptor
Thr 11 66 CX THR 11 D HBDonor
Thr 11 66 CX THR 11 D VdWContact
Cys 12 67 CX ILE 10 D Hydrophobic
Cys 12 67 CX ILE 10 D VdWContact
Lys 14 69 N-loop LYS 7 D Hydrophobic
Lys 14 69 N-loop LYS 7 D VdWContact
Lys 14 69 N-loop ASN 9 D Hydrophobic
Lys 14 69 N-loop ASN 9 D VdWContact
Pro 20 76 N-loop GLN 68 B Hydrophobic
Pro 20 76 N-loop GLN 68 B VdWContact
Ala 22 81 N-loop ILE 25 B Hydrophobic
Ala 22 81 N-loop ARG 44 B VdWContact
Leu 23 82 N-loop ILE 25 B Hydrophobic
His 26 85 B1 LEU 48 D Hydrophobic
His 26 85 B1 HIS 46 D Hydrophobic
His 26 85 B1 HIS 46 D VdWContact
Gln 28 87 B1 ARG 47 D VdWContact
Gln 28 87 B1 LEU 48 D HBAcceptor
Gln 28 87 B1 LEU 48 D HBDonor
Gln 28 87 B1 LEU 48 D VdWContact
Ile 40 102 B2 LEU 48 D Hydrophobic
Arg 44 106 40s-loop HIS 46 B VdWContact
Arg 44 106 40s-loop HIS 46 C Hydrophobic
His 46 113 40s-loop GLN 28 D HBAcceptor
His 46 113 40s-loop GLN 28 D VdWContact
His 46 113 40s-loop ARG 44 C VdWContact
His 46 113 40s-loop HIS 46 C Hydrophobic
Leu 48 115 B3 ILE 40 D Hydrophobic
Leu 48 115 B3 LEU 48 D Hydrophobic
Leu 48 115 B3 ILE 10 D Hydrophobic

Interaction pattern search
Search complexes with similar interaction patterns:

Specify the minimum similarity (0.00 no similarity, 1.00 identical)